Non-Coding RNA Search

Ova1-OVRM10185E10

Sequence:


               
               TCCAGGAGGGCAGGGGCTGTGTGTTGAACAAGTTTGGTAGAGTCTAAAAGGCAGGGCCAG
CAGGTAGGTGCTGAGTATGCTTTCCTTCTGTTTTTACCAACCACACGCAGGCTGTTTTCA
TATAATCAGGATGAATCTAATTTTAAAATGAACAACCGTGTGTCCTTAGATGAACCAGAA
TATACACTTACAAGGCGCTGCTGTCCTGCATTATAAATAAGGGAATAGTTTGTCCTGCAG
AAAAGCTCTGCTGTTCTTTTCCCTTAAAACAACAACAAACAAACCAAAAAAACGTCTCCA
TACGTAAGAACTGAGATAGATCTTCCTGTCTCCTCACCTGAGTTGGCAAGAAATCAGGGC
CCCCAAGTGGATATTCTCTGCAAAGATGAAACCCAGCAAACATCCACAATCCAAGAAGAA
AGCCTTCTGAGGATTTATGAAGAAGCATCCTTAAGAATGGCTGACTGTGAGAGTTCCCTC
ATGGCTCACTGGAttaaggatccagcgttgtcattgctgtggtgtgggttcaatccctgg
cctggtaacttcTGAGTAGATCCTAAGCTTGGTGCCTGATTGCCAACTGTATGGCAGTGG
GAGTTCTTCGGCTATGGCTTCAGGTTCCTTCAGGGCCACAGGAAAAGGCTGAGGCTCTTG
GAAAGTGTCAGCTGTGCTGCTCTTTGCAGACCTATTGCTGGTGTGTGGAACCCCTGGTGC
GCTTTGCTACATGGAGTCCCTCAAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAGGAGGGCAGGGGCTGTGTGTTGAACAAGTTTGGTAGAGTCTAAAAGGCAGGGCCAG
CAGGTAGGTGCTGAGTATGCTTTCCTTCTGTTTTTACCAACCACACGCAGGCTGTTTTCA
TATAATCAGGATGAATCTAATTTTAAAATGAACAACCGTGTGTCCTTAGATGAACCAGAA
TATACACTTACAAGGCGCTGCTGTCCTGCATTATAAATAAGGGAATAGTTTGTCCTGCAG
AAAAGCTCTGCTGTTCTTTTCCCTTAAAACAACAACAAACAAACCAAAAAAACGTCTCCA
TACGTAAGAACTGAGATAGATCTTCCTGTCTCCTCACCTGAGTTGGCAAGAAATCAGGGC
CCCCAAGTGGATATTCTCTGCAAAGATGAAACCCAGCAAACATCCACAATCCAAGAAGAA
AGCCTTCTGAGGATTTATGAAGAAGCATCCTTAAGAATGGCTGACTGTGAGAGTTCCCTC
ATGGCTCACTGGAttaaggatccagcgttgtcattgctgtggtgtgggttcaatccctgg
cctggtaacttcTGAGTAGATCCTAAGCTTGGTGCCTGATTGCCAACTGTATGGCAGTGG
GAGTTCTTCGGCTATGGCTTCAGGTTCCTTCAGGGCCACAGGAAAAGGCTGAGGCTCTTG
GAAAGTGTCAGCTGTGCTGCTCTTTGCAGACCTATTGCTGGTGTGTGGAACCCCTGGTGC
GCTTTGCTACATGGAGTCCCTCAAGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               277-457, - strand, RNAz p=0.993924

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               277-457, - strand, RNAz p=0.993924

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-469, gnl|bosTau2|chr27 (28208719-28209198)
               

               
               1-469, gnl|Hg17|chr3 (24498020-24497550)
               

               
               1-469, gnl|Mm7|chr14 (15488788-15489315)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-469, gnl|bosTau2|chr27 (28208719-28209198)
               

               
               1-469, gnl|Hg17|chr3 (24498020-24497550)
               

               
               1-469, gnl|Mm7|chr14 (15488788-15489315)

	1-469, gnl\|bosTau2\|chr27 (28208719-28209198)
	1-469, gnl\|Hg17\|chr3 (24498020-24497550)
	1-469, gnl\|Mm7\|chr14 (15488788-15489315)