Ova1-OVRM10192G03
|
TAGTAAATTGAATTTTTTGGTGTGTAATTTGTACAGAAACTGACAAGTGCGAGCCCCCCC
CCCATCATTAGTCATCGGGCTTAGCGGACACAGAGGTAGTAATCGGCAAGGGCAGGCATT
CTGGTGTCGACTTTCTTTATTTGGTCCAGGCACGGGCAGCTCCTGTCACGCGGCATCACT
CCACTATTAGCGAATTTCGCCCCAGGGCAGCTGGGACGCTGCGCTGGGGCAGATGTTCTT
TCCAGCCTATTCAGTGACCATTCTTGGGGGTTGTTTACTGTTGCCATGGTGACTTTCATT
TCCATAGCAGCAGCGCTGCTGTTTCTCAGAGGAAAATGAATTTCGTTATAAAAGGATAAT
ATTTTTCTCTCTGTATATAACCTGCCATCTGTCAACTGGTGGATCAGAAAGGATTCAGAA
ACCTATTAAGACTGATAGCAATGAAGTGATGAGTATTATTTTTGTTTCAGCTCAGTCCCA
TATTAAAAGCAATAATAGCAAACATGTCCCTTCAACAATCAGAACTTTCATTTTTTTTCT
TTATATTTTAAGTGCTTTTAAGGCTTTCTCTGCCTCCACCACTGCTGTGACAACCTCATA
AAATACAGTTTACGTTCTGCTGACAAATGGAAATGGACCAGGCTCTTGTTTGTATCTCAC
TAGATGCAGGTGTATTTCGTGCTTTCTCTTCTTGATGCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TAGTAAATTGAATTTTTTGGTGTGTAATTTGTACAGAAACTGACAAGTGCGAGCCCCCCC
CCCATCATTAGTCATCGGGCTTAGCGGACACAGAGGTAGTAATCGGCAAGGGCAGGCATT
CTGGTGTCGACTTTCTTTATTTGGTCCAGGCACGGGCAGCTCCTGTCACGCGGCATCACT
CCACTATTAGCGAATTTCGCCCCAGGGCAGCTGGGACGCTGCGCTGGGGCAGATGTTCTT
TCCAGCCTATTCAGTGACCATTCTTGGGGGTTGTTTACTGTTGCCATGGTGACTTTCATT
TCCATAGCAGCAGCGCTGCTGTTTCTCAGAGGAAAATGAATTTCGTTATAAAAGGATAAT
ATTTTTCTCTCTGTATATAACCTGCCATCTGTCAACTGGTGGATCAGAAAGGATTCAGAA
ACCTATTAAGACTGATAGCAATGAAGTGATGAGTATTATTTTTGTTTCAGCTCAGTCCCA
TATTAAAAGCAATAATAGCAAACATGTCCCTTCAACAATCAGAACTTTCATTTTTTTTCT
TTATATTTTAAGTGCTTTTAAGGCTTTCTCTGCCTCCACCACTGCTGTGACAACCTCATA
AAATACAGTTTACGTTCTGCTGACAAATGGAAATGGACCAGGCTCTTGTTTGTATCTCAC
TAGATGCAGGTGTATTTCGTGCTTTCTCTTCTTGATGCT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-545, gnl|bosTau2|chr10 (68451279-68450740) |
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2-545, gnl|Hg17|chr14 (88727662-88727100) |
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2-545, gnl|Mm7|chr12 (96715671-96715104) |
| |
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552-698, gnl|bosTau2|chr10 (68450703-68450560) |
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552-698, gnl|canFam2|chr8 (63396133-63396597) |
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552-698, gnl|echTel1|scaffold_271155 (1427-969) |
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552-698, gnl|galGal2|chr5 (40234273-40234647) |
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552-698, gnl|hg17|chr14 (88726749-88727186) |
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552-698, gnl|Hg17|chr14 (88727090-88726942) |
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552-698, gnl|loxAfr1|scaffold_187 (95416-95859) |
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552-698, gnl|mm7|chr12 (96714754-96715184) |
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552-698, gnl|Mm7|chr12 (96715094-96714953) |
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552-698, gnl|monDom2|scaffold_8 (38022769-38022321) |
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552-698, gnl|oryCun1|scaffold_178224 (51929-51488) |
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552-698, gnl|panTro1|chr15 (88984762-88985204) |
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552-698, gnl|rheMac2|chr7 (152392327-152392766) |
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552-698, gnl|rn3|chr6 (123421211-123421657) |
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552-698, gnl|xenTro1|scaffold_22 (1835865-1836152) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-545, gnl|bosTau2|chr10 (68451279-68450740) |
|
2-545, gnl|Hg17|chr14 (88727662-88727100) |
|
2-545, gnl|Mm7|chr12 (96715671-96715104) |
| |
|
552-698, gnl|bosTau2|chr10 (68450703-68450560) |
|
552-698, gnl|canFam2|chr8 (63396133-63396597) |
|
552-698, gnl|echTel1|scaffold_271155 (1427-969) |
|
552-698, gnl|galGal2|chr5 (40234273-40234647) |
|
552-698, gnl|hg17|chr14 (88726749-88727186) |
|
552-698, gnl|Hg17|chr14 (88727090-88726942) |
|
552-698, gnl|loxAfr1|scaffold_187 (95416-95859) |
|
552-698, gnl|mm7|chr12 (96714754-96715184) |
|
552-698, gnl|Mm7|chr12 (96715094-96714953) |
|
552-698, gnl|monDom2|scaffold_8 (38022769-38022321) |
|
552-698, gnl|oryCun1|scaffold_178224 (51929-51488) |
|
552-698, gnl|panTro1|chr15 (88984762-88985204) |
|
552-698, gnl|rheMac2|chr7 (152392327-152392766) |
|
552-698, gnl|rn3|chr6 (123421211-123421657) |
|
552-698, gnl|xenTro1|scaffold_22 (1835865-1836152) |
