Non-Coding RNA Search

Ova1-OVRM10193F07

Sequence:


               
               ACTGGAATCCAGTCCCCCAGGCGTGTGCCCTCTGCCTCCCGCTCTCTGCTGTCACAGCCT
CAGCTGTCCTTGGTGGACATCTCTGTGCTGATCCCATGAGGGCCTCTGTGGAGCTTCTGC
TCTCACCAGCGTCCCCCCCAACACTGGGGTGGTTTTCTAGCCTGTGGGCCCCTAGCCTAG
CACCACCCTCCCCCTTTTCGCCACAACAGTAGGATCTCAgttcccaaaccagggattgaa
cccgggccacagcagtgaaagcgccaaatcctagccactagacaccagggaCCTCCCCTC
AAGCCCTTTTTAGATAAATAGAGGCCTGGGTAAACTAAGAAACGGTATGATTATTCTCTC
ACCTGCTTCCTGCAAGTGCCTTTAAGAAACCATGGCATCACTTTGCACCTGAAACCAAAA
CCTCTGCCCTCTGGCCGGATCGGGTGCAGGGCTGTCTCAGCAGGACAGGGGCTGAGTACC
CCTGGGTCAGAATGAAGCCCTCGGGTTCCTCGCGTCTGTTCCTGCCTCAGACCACTCCCA
TTCTGACCACTTCTCTCACCGCGCCCGCTCCCCCAGCCCCCTGCTGCCGGGTGACCCGGG
CTGCTTTAGCTAGCGGAGATTGGGTGGTTGTTACAGGGCCTGCCGTGCCTTTTAAATTTT
AAAGTCAGCGAGCTCTGAAATCCTTCTTAACCTGAACGGACCCTGTTCTTCTTGTTACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGAATCCAGTCCCCCAGGCGTGTGCCCTCTGCCTCCCGCTCTCTGCTGTCACAGCCT
CAGCTGTCCTTGGTGGACATCTCTGTGCTGATCCCATGAGGGCCTCTGTGGAGCTTCTGC
TCTCACCAGCGTCCCCCCCAACACTGGGGTGGTTTTCTAGCCTGTGGGCCCCTAGCCTAG
CACCACCCTCCCCCTTTTCGCCACAACAGTAGGATCTCAgttcccaaaccagggattgaa
cccgggccacagcagtgaaagcgccaaatcctagccactagacaccagggaCCTCCCCTC
AAGCCCTTTTTAGATAAATAGAGGCCTGGGTAAACTAAGAAACGGTATGATTATTCTCTC
ACCTGCTTCCTGCAAGTGCCTTTAAGAAACCATGGCATCACTTTGCACCTGAAACCAAAA
CCTCTGCCCTCTGGCCGGATCGGGTGCAGGGCTGTCTCAGCAGGACAGGGGCTGAGTACC
CCTGGGTCAGAATGAAGCCCTCGGGTTCCTCGCGTCTGTTCCTGCCTCAGACCACTCCCA
TTCTGACCACTTCTCTCACCGCGCCCGCTCCCCCAGCCCCCTGCTGCCGGGTGACCCGGG
CTGCTTTAGCTAGCGGAGATTGGGTGGTTGTTACAGGGCCTGCCGTGCCTTTTAAATTTT
AAAGTCAGCGAGCTCTGAAATCCTTCTTAACCTGAACGGACCCTGTTCTTCTTGTTACTC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               291-221, tRNA Pseudo : RF00005;tRNA; (AJ410870.2/120022-120093), RaveNnA 
Score=31.23

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               291-221, tRNA Pseudo : RF00005;tRNA; (AJ410870.2/120022-120093), RaveNnA 
Score=31.23