Non-Coding RNA Search

Ova1-OVRM10199F10

Sequence:


               
               ATCCGGGTGCAACCGGGGAACGGCTCGGGAGCGGTTTGCGTTCCAAGTCCCGGCCTCTAT
CAGGAGGTGGCTTGGACCTAGGCACTTTTTCCAAATACTAACAGCTACCACCGATTGAAC
TCTCACCAGGGGCCTGCTCTATGCCAAGCCCTGGCTTAGAAAAATAAAAGAACTGGCCAC
TGAATTCGCACAACTCTATCCCCAGATGTTGCACCTATTTTACTGAGCAACCTGATGCTT
AGATAAGGGAAGCCATGGCTTCTGAGTCTCGCATGGATCAGATCCAGTTGGAGACCACCT
AGCATGGTGTCTGCCCACAGGGAAGAGCTGCTGGAGCAGAGGAGCAGAAAACAGAGACAG
CACCTCTAGACAAGCCTGCTTCAGTGTCTCCAGATTCTCCAAAGGCCCCGAGATGGATGG
GGAGCTGCTGCCAAAAGAGGGGGGTAGAAATGGGAGCTCTCACACCTGCCATTGGATGGA
GCCGCACAAACCCAGCATGAGCACCTTCCCTGAAGGAGGCCCAAGGCTAAAAAGAACACC
CCTGTGGTCCAAGAAGCTGATGGTGTAGACAGCCTTCTCGTCCTAAGGCTGAGAATGCCA
AGACTCATAGAGTTGAGCTGAAAAAGTTTTGAATTTGTCACGAGGCTTTNCAAAGTGGGA
GATTTCACATTAACATTTAGATGTACAGCTTCGGTTGGAAGAAAAAAAAAGAAAAGAATA
TCCTAACACCTGATGTGCCTTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCGGGTGCAACCGGGGAACGGCTCGGGAGCGGTTTGCGTTCCAAGTCCCGGCCTCTAT
CAGGAGGTGGCTTGGACCTAGGCACTTTTTCCAAATACTAACAGCTACCACCGATTGAAC
TCTCACCAGGGGCCTGCTCTATGCCAAGCCCTGGCTTAGAAAAATAAAAGAACTGGCCAC
TGAATTCGCACAACTCTATCCCCAGATGTTGCACCTATTTTACTGAGCAACCTGATGCTT
AGATAAGGGAAGCCATGGCTTCTGAGTCTCGCATGGATCAGATCCAGTTGGAGACCACCT
AGCATGGTGTCTGCCCACAGGGAAGAGCTGCTGGAGCAGAGGAGCAGAAAACAGAGACAG
CACCTCTAGACAAGCCTGCTTCAGTGTCTCCAGATTCTCCAAAGGCCCCGAGATGGATGG
GGAGCTGCTGCCAAAAGAGGGGGGTAGAAATGGGAGCTCTCACACCTGCCATTGGATGGA
GCCGCACAAACCCAGCATGAGCACCTTCCCTGAAGGAGGCCCAAGGCTAAAAAGAACACC
CCTGTGGTCCAAGAAGCTGATGGTGTAGACAGCCTTCTCGTCCTAAGGCTGAGAATGCCA
AGACTCATAGAGTTGAGCTGAAAAAGTTTTGAATTTGTCACGAGGCTTTNCAAAGTGGGA
GATTTCACATTAACATTTAGATGTACAGCTTCGGTTGGAAGAAAAAAAAAGAAAAGAATA
TCCTAACACCTGATGTGCCTTCTG

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

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               1-276, gnl|bosTau2|chr15 (46354887-46354603)
               

               
               1-276, gnl|Hg17|chr11 (44543228-44542961)
               


               
               288-724, gnl|bosTau2|chr15 (46349393-46348965)
               

               
               288-724, gnl|canFam2|chr18 (47753320-47752997)
               

               
               288-724, gnl|hg17|chr11 (44535552-44535863)
               

               
               288-724, gnl|Hg17|chr11 (44536581-44535552)
               

               
               288-724, gnl|loxAfr1|scaffold_13888 (20748-21126)
               

               
               288-724, gnl|panTro1|chr9 (45037545-45037856)
               

               
               288-724, gnl|rheMac2|chr14 (27547496-27547174)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-276, gnl|bosTau2|chr15 (46354887-46354603)
               

               
               1-276, gnl|Hg17|chr11 (44543228-44542961)
               


               
               288-724, gnl|bosTau2|chr15 (46349393-46348965)
               

               
               288-724, gnl|canFam2|chr18 (47753320-47752997)
               

               
               288-724, gnl|hg17|chr11 (44535552-44535863)
               

               
               288-724, gnl|Hg17|chr11 (44536581-44535552)
               

               
               288-724, gnl|loxAfr1|scaffold_13888 (20748-21126)
               

               
               288-724, gnl|panTro1|chr9 (45037545-45037856)
               

               
               288-724, gnl|rheMac2|chr14 (27547496-27547174)

	1-276, gnl\|bosTau2\|chr15 (46354887-46354603)
	1-276, gnl\|Hg17\|chr11 (44543228-44542961)

	288-724, gnl\|bosTau2\|chr15 (46349393-46348965)
	288-724, gnl\|canFam2\|chr18 (47753320-47752997)
	288-724, gnl\|hg17\|chr11 (44535552-44535863)
	288-724, gnl\|Hg17\|chr11 (44536581-44535552)
	288-724, gnl\|loxAfr1\|scaffold_13888 (20748-21126)
	288-724, gnl\|panTro1\|chr9 (45037545-45037856)
	288-724, gnl\|rheMac2\|chr14 (27547496-27547174)