Non-Coding RNA Search

Ova1-OVRM10200D05

Sequence:


               
               TTTATTTAGGTCTTGATTTACTTTGATTCCTAAATGGAAGGCAACATGGTTTATTATAAA
GGGCACTGGACTAAGAGTGAGGATACGTGTCTCTCAGTTCCTGGCAAAAATCACCAATTC
TCCATGTAACTATGAGCAAGTTACTGTATCTCTCTGGGAGAAATATGGAGGAGGACCAGA
AGATTCTGTTTTTAAATAGGTTTTATGTTTCCTTTTCTGTAATGACTGCAGTGAATTTTA
AGGGGCCTAAAATCTTTTTATGAGGAGAAGTTATGTTTTGCTTCCCCAAAGCTGTGGGCT
CCTGATCCTTCCCTCTGTAATAGGCAGATACAGGAGGGAGGCGCAGACTGATGTGGGTAC
TCACAGGTAGGGCTGGATTTTGTGCAGGTGAAGTTCTTTAAAATTATTGGAAGATGAAGA
AGTATTAGTCTTTAAAAAAAATTTTGAAGATTAGTACTCTTGGGAGGAAGGGAGTTGTGC
CCATGGCATATGGAAGTTCTAAGGCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTATTTAGGTCTTGATTTACTTTGATTCCTAAATGGAAGGCAACATGGTTTATTATAAA
GGGCACTGGACTAAGAGTGAGGATACGTGTCTCTCAGTTCCTGGCAAAAATCACCAATTC
TCCATGTAACTATGAGCAAGTTACTGTATCTCTCTGGGAGAAATATGGAGGAGGACCAGA
AGATTCTGTTTTTAAATAGGTTTTATGTTTCCTTTTCTGTAATGACTGCAGTGAATTTTA
AGGGGCCTAAAATCTTTTTATGAGGAGAAGTTATGTTTTGCTTCCCCAAAGCTGTGGGCT
CCTGATCCTTCCCTCTGTAATAGGCAGATACAGGAGGGAGGCGCAGACTGATGTGGGTAC
TCACAGGTAGGGCTGGATTTTGTGCAGGTGAAGTTCTTTAAAATTATTGGAAGATGAAGA
AGTATTAGTCTTTAAAAAAAATTTTGAAGATTAGTACTCTTGGGAGGAAGGGAGTTGTGC
CCATGGCATATGGAAGTTCTAAGGCATA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               78-221, - strand, RNAz p=0.999955

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               78-221, - strand, RNAz p=0.999955

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-457, gnl|bosTau2|chr2 (83583101-83583570)
               

               
               2-457, gnl|Hg17|chr1 (16365792-16364909)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-457, gnl|bosTau2|chr2 (83583101-83583570)
               

               
               2-457, gnl|Hg17|chr1 (16365792-16364909)

	2-457, gnl\|bosTau2\|chr2 (83583101-83583570)
	2-457, gnl\|Hg17\|chr1 (16365792-16364909)