Non-Coding RNA Search

Ova1-OVRM10201B04

Sequence:


               
               CTTAGTGTACCAAGTTGTTTTCTTAAACAAGAACCAAGCCACTGTTGAGGTTTCTGAGCC
TCATTTTTTAGTTCCAGAATTGAAGCATGTAAAACTAAAGTCCTGGGTCTCAGATTTGAG
TAATACCGAACAAACAGTAGTTCTTGATGGGACTCCTAAGAGGAAAGATACTTGAGAGAA
AAAAAAAAAAATCTGCTGTGTTTATCTCCTTAAGTACTTAAAAATACGCTTCACAGACAG
TACTTTCTGGACCGTTCTGCTGACCTTTCCCCTTGTTTATCAAATGCCTCTTTTACGCAA
GGCAGTGGAGCTTTCCAGAAAATGGTTAGATTGGCCACTTGCTAGAGACTGTCCAGAAGA
TAGTTGTGGATACTGTGGTCCAGGGTCTTTCTTTTGGTCATTTGTCTCATCACATTTTTT
TACCAGAACTCTGTAACATATGCATAAGCAAGTATTACTGTATTTCATTGACTCTTAAGA
TGTCATCCATTGTGGATGCGTTTTTATTTCATACATTGCTTAAAAAAAAAAAAAGACTGT
TAGCATGAAAAATATTTTCTTTCTTTTTTTTTTTATTTTCCCACTGTACAGCAAGGGGGT
CAGGTTATACATTACAATTACATTTTTCCCCCACCCTATGAAAAATATTTTCTTATCACT
CAACTATTTACATGCATCCCAATTTCAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAGTGTACCAAGTTGTTTTCTTAAACAAGAACCAAGCCACTGTTGAGGTTTCTGAGCC
TCATTTTTTAGTTCCAGAATTGAAGCATGTAAAACTAAAGTCCTGGGTCTCAGATTTGAG
TAATACCGAACAAACAGTAGTTCTTGATGGGACTCCTAAGAGGAAAGATACTTGAGAGAA
AAAAAAAAAAATCTGCTGTGTTTATCTCCTTAAGTACTTAAAAATACGCTTCACAGACAG
TACTTTCTGGACCGTTCTGCTGACCTTTCCCCTTGTTTATCAAATGCCTCTTTTACGCAA
GGCAGTGGAGCTTTCCAGAAAATGGTTAGATTGGCCACTTGCTAGAGACTGTCCAGAAGA
TAGTTGTGGATACTGTGGTCCAGGGTCTTTCTTTTGGTCATTTGTCTCATCACATTTTTT
TACCAGAACTCTGTAACATATGCATAAGCAAGTATTACTGTATTTCATTGACTCTTAAGA
TGTCATCCATTGTGGATGCGTTTTTATTTCATACATTGCTTAAAAAAAAAAAAAGACTGT
TAGCATGAAAAATATTTTCTTTCTTTTTTTTTTTATTTTCCCACTGTACAGCAAGGGGGT
CAGGTTATACATTACAATTACATTTTTCCCCCACCCTATGAAAAATATTTTCTTATCACT
CAACTATTTACATGCATCCCAATTTCAAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               44-163, - strand, RNAz p=0.534996

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               44-163, - strand, RNAz p=0.534996

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-528, gnl|bosTau2|chr6 (54576540-54576026)
               

               
               4-528, gnl|Hg17|chr4 (82742158-82741729)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-528, gnl|bosTau2|chr6 (54576540-54576026)
               

               
               4-528, gnl|Hg17|chr4 (82742158-82741729)

	4-528, gnl\|bosTau2\|chr6 (54576540-54576026)
	4-528, gnl\|Hg17\|chr4 (82742158-82741729)