Non-Coding RNA Search

Ova1-OVRM10204F12

Sequence:


               
               ATATCATCCCAGATTTCTGTAGCAGATGATAGTGAGGAAAGTCTTCTTGGACATTTAATG
ATTCTGGCAAGAAATGTGCTGCTGATCTGGGCCCAAAGAAGGGTTGTCGAATGACAGTAA
ATGAAGATTCACATGGAGGATAGTGTCTGTCATGTTCATTTTCATGTTCTTGGAGGTTGG
TAGATGAATTGGCCTCCTGATGAAGCATGTTCTGGAAATAATTTTCCCTTCTCTAGGCAG
TCATCAGGTTTTCAAGTTCCAGTGTTGAACGGTACACTTATTTTTGCCTGTATATATGGG
TTGAGGAAATAATTTTTGAAACCCATACGTAATAAAAGGCATCAGTGTGTGGTTAAAAAA
GGAGAGAGGGTACTTGTTAAATTGGGGAAGTGTTTTATCTAGAAAAACACAGGGGTATAC
AAGAATGTGTGTATAACCAGTATTTACCATTATAATACTGAAATATAGGAAATAAAATTT
CACTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATCATCCCAGATTTCTGTAGCAGATGATAGTGAGGAAAGTCTTCTTGGACATTTAATG
ATTCTGGCAAGAAATGTGCTGCTGATCTGGGCCCAAAGAAGGGTTGTCGAATGACAGTAA
ATGAAGATTCACATGGAGGATAGTGTCTGTCATGTTCATTTTCATGTTCTTGGAGGTTGG
TAGATGAATTGGCCTCCTGATGAAGCATGTTCTGGAAATAATTTTCCCTTCTCTAGGCAG
TCATCAGGTTTTCAAGTTCCAGTGTTGAACGGTACACTTATTTTTGCCTGTATATATGGG
TTGAGGAAATAATTTTTGAAACCCATACGTAATAAAAGGCATCAGTGTGTGGTTAAAAAA
GGAGAGAGGGTACTTGTTAAATTGGGGAAGTGTTTTATCTAGAAAAACACAGGGGTATAC
AAGAATGTGTGTATAACCAGTATTTACCATTATAATACTGAAATATAGGAAATAAAATTT
CACTCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               2-238, - strand, RNAz p=0.996083

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-238, - strand, RNAz p=0.996083

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-342, gnl|bosTau2|chr20 (6111230-6110879)
               

               
               1-342, gnl|Hg17|chr7 (142526816-142526467)
               

               
               1-342, gnl|Mm7|chr11 (54826669-54827242)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-342, gnl|bosTau2|chr20 (6111230-6110879)
               

               
               1-342, gnl|Hg17|chr7 (142526816-142526467)
               

               
               1-342, gnl|Mm7|chr11 (54826669-54827242)

	1-342, gnl\|bosTau2\|chr20 (6111230-6110879)
	1-342, gnl\|Hg17\|chr7 (142526816-142526467)
	1-342, gnl\|Mm7\|chr11 (54826669-54827242)