Ova1-OVRM10206A12
|
ATCAAAGTTGGTCTCACCTTGAGTAGCACTGAGTCCCTTGTCTTCTCCTTTGTAGCCCTC
GGCGGTTCTTCCTCCTGTCGTCCCAGGTGGCTCTCCACCCTGAGTACAGAGAGGAGCTGG
ACGCCCTCCAGGCCCGACACGGAGAGGCAGTGTTAGTCCTGGACAAGTGCACCAATCTCT
CCGAGGGCGTCCCCCCCGCCCGGAAGCGCTGCCACAAGCACCAGGTCTTCGATTACCCGC
AGGTGCTGCAGGTGAGGGCCGCGCACCCCCTCTCCCGGGCTCAGCAGAGGCCACGTCCAT
GGTAAAACTGACCCCAACAAATAGGAGTTGTTGCATCCAGCAGATCTCCCCAAGGGGAGA
GTGAAACCGAGGACTGCTCCTGGCTGGAGTCGTGGGCCTCCAGGTGCTTCCACGTCTGTG
TACAGTTTGCGCATGTCCCCACTCCTTGCAAATCTCCATCTTACTTCAGAACCGCAAATC
CAGTAGATTTACAAAGAAACCACGCAGATGGAGCAGGCACCTGTATTTTCCTTTTGTTCC
TGTGTTCATCATCCAACCCANAGGAGTCTCCTTTTTTAAGGTGCAGCTTGTATCCTCTGA
CTGTGCCAACCCACACGGCCACCATCAGCTTTTCTGGGAGTGGAAGATTTTTGTTTGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCAAAGTTGGTCTCACCTTGAGTAGCACTGAGTCCCTTGTCTTCTCCTTTGTAGCCCTC
GGCGGTTCTTCCTCCTGTCGTCCCAGGTGGCTCTCCACCCTGAGTACAGAGAGGAGCTGG
ACGCCCTCCAGGCCCGACACGGAGAGGCAGTGTTAGTCCTGGACAAGTGCACCAATCTCT
CCGAGGGCGTCCCCCCCGCCCGGAAGCGCTGCCACAAGCACCAGGTCTTCGATTACCCGC
AGGTGCTGCAGGTGAGGGCCGCGCACCCCCTCTCCCGGGCTCAGCAGAGGCCACGTCCAT
GGTAAAACTGACCCCAACAAATAGGAGTTGTTGCATCCAGCAGATCTCCCCAAGGGGAGA
GTGAAACCGAGGACTGCTCCTGGCTGGAGTCGTGGGCCTCCAGGTGCTTCCACGTCTGTG
TACAGTTTGCGCATGTCCCCACTCCTTGCAAATCTCCATCTTACTTCAGAACCGCAAATC
CAGTAGATTTACAAAGAAACCACGCAGATGGAGCAGGCACCTGTATTTTCCTTTTGTTCC
TGTGTTCATCATCCAACCCANAGGAGTCTCCTTTTTTAAGGTGCAGCTTGTATCCTCTGA
CTGTGCCAACCCACACGGCCACCATCAGCTTTTCTGGGAGTGGAAGATTTTTGTTTGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
35-433, gnl|bosTau2|chr15 (47284010-47283620) |
|
35-433, gnl|Hg17|chr11 (44102896-44103302) |
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35-433, gnl|Mm7|chr2 (93649103-93648666) |
| |
|
435-656, gnl|bosTau2|chr15 (47283599-47283376) |
|
435-656, gnl|canFam2|chr18 (48141438-48141286) |
|
435-656, gnl|dasNov1|scaffold_15095 (9316-9465) |
|
435-656, gnl|hg17|chr11 (44103314-44103466) |
|
435-656, gnl|Hg17|chr11 (44103323-44103548) |
|
435-656, gnl|loxAfr1|scaffold_44004 (1820-1970) |
|
435-656, gnl|mm7|chr2 (93648656-93648515) |
|
435-656, gnl|Mm7|chr2 (93648646-93648452) |
|
435-656, gnl|monDom2|scaffold_33 (9506707-9506895) |
|
435-656, gnl|oryCun1|scaffold_203318 (54076-54224) |
|
435-656, gnl|panTro1|chr9 (44600200-44600352) |
|
435-656, gnl|rheMac2|chr14 (27986488-27986336) |
|
435-656, gnl|rn3|chr3 (78113302-78113153) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
35-433, gnl|bosTau2|chr15 (47284010-47283620) |
|
35-433, gnl|Hg17|chr11 (44102896-44103302) |
|
35-433, gnl|Mm7|chr2 (93649103-93648666) |
| |
|
435-656, gnl|bosTau2|chr15 (47283599-47283376) |
|
435-656, gnl|canFam2|chr18 (48141438-48141286) |
|
435-656, gnl|dasNov1|scaffold_15095 (9316-9465) |
|
435-656, gnl|hg17|chr11 (44103314-44103466) |
|
435-656, gnl|Hg17|chr11 (44103323-44103548) |
|
435-656, gnl|loxAfr1|scaffold_44004 (1820-1970) |
|
435-656, gnl|mm7|chr2 (93648656-93648515) |
|
435-656, gnl|Mm7|chr2 (93648646-93648452) |
|
435-656, gnl|monDom2|scaffold_33 (9506707-9506895) |
|
435-656, gnl|oryCun1|scaffold_203318 (54076-54224) |
|
435-656, gnl|panTro1|chr9 (44600200-44600352) |
|
435-656, gnl|rheMac2|chr14 (27986488-27986336) |
|
435-656, gnl|rn3|chr3 (78113302-78113153) |
