Non-Coding RNA Search

Ova1-OVRM10211F03

Sequence:


               
               ATTTATAACTTTGTAGTCATCTAAGTCTTCTTTGTTATTTTCTCAATGCCTCAGCAGTAG
TTAGTTATTAAAATAGTCTGGAAAGTAACATTCTGGGTGTTAGGACCTAAAACTGGGATT
ACTGATTAGAATATAGACTCAGAATTTGGTGATGGAAGAAACACATAAGTCTAATAAGGA
GTGTCAGAGGGGCTTATGATGCAAGAAGTATTCGTGTAAATGATTAAAGGGGGACAATAA
TACACAACTTTAAAGGAATGGTATCTTTGTGTATGACACTGTTACTTGGATATCAGGCAG
CATTTAAATAAATCTAGGTTTTTTTCCCTTTTACTCCTAAACTCCTATGCCTGTTCTGTT
GAGCCTGACAGCACATGTTTGTTGTGTACATCCACTGTACATACTATTCCCTCAACTTAG
AATGACTATCCCTCACTCTTCTGGCTTGTTCATTCTGTTTGTCAGATCTTGGATCAGTTA
TTAACTCTTCTGGAGACCCTCCTGAGTCTCCCCACCTCTCACCTATTTATTCTCTGCCTC
CCCAACTACTGTGTAAGCTCCTGGCCTGTAAAGGCAAGGATCTTATGGGTCTTGTTCACC
ACAGTATCTGCAGCTCCTTATATAAAACCCTGGTACATGATAGACACTTGATAAACATGT
GTTGAAATGAATAACCTGGAGACAGATATTATTGCTGTTTGCATGTTTCCTTCATCCACT
TATTTAATTGGATAAAAGAAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTATAACTTTGTAGTCATCTAAGTCTTCTTTGTTATTTTCTCAATGCCTCAGCAGTAG
TTAGTTATTAAAATAGTCTGGAAAGTAACATTCTGGGTGTTAGGACCTAAAACTGGGATT
ACTGATTAGAATATAGACTCAGAATTTGGTGATGGAAGAAACACATAAGTCTAATAAGGA
GTGTCAGAGGGGCTTATGATGCAAGAAGTATTCGTGTAAATGATTAAAGGGGGACAATAA
TACACAACTTTAAAGGAATGGTATCTTTGTGTATGACACTGTTACTTGGATATCAGGCAG
CATTTAAATAAATCTAGGTTTTTTTCCCTTTTACTCCTAAACTCCTATGCCTGTTCTGTT
GAGCCTGACAGCACATGTTTGTTGTGTACATCCACTGTACATACTATTCCCTCAACTTAG
AATGACTATCCCTCACTCTTCTGGCTTGTTCATTCTGTTTGTCAGATCTTGGATCAGTTA
TTAACTCTTCTGGAGACCCTCCTGAGTCTCCCCACCTCTCACCTATTTATTCTCTGCCTC
CCCAACTACTGTGTAAGCTCCTGGCCTGTAAAGGCAAGGATCTTATGGGTCTTGTTCACC
ACAGTATCTGCAGCTCCTTATATAAAACCCTGGTACATGATAGACACTTGATAAACATGT
GTTGAAATGAATAACCTGGAGACAGATATTATTGCTGTTTGCATGTTTCCTTCATCCACT
TATTTAATTGGATAAAAGAAGGA

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               31-134, - strand, RNAz p=0.748662
               

               
               344-591, - strand, RNAz p=0.990729

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               31-134, - strand, RNAz p=0.748662
               

               
               344-591, - strand, RNAz p=0.990729

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-725, gnl|bosTau2|chrX (39137202-39137962)
               

               
               1-725, gnl|Hg17|chrX (19944139-19943064)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-725, gnl|bosTau2|chrX (39137202-39137962)
               

               
               1-725, gnl|Hg17|chrX (19944139-19943064)

	31-134, - strand, RNAz p=0.748662
	344-591, - strand, RNAz p=0.990729

	1-725, gnl\|bosTau2\|chrX (39137202-39137962)
	1-725, gnl\|Hg17\|chrX (19944139-19943064)