Non-Coding RNA Search

Ova1-OVRM10212B10

Sequence:


               
               TTATTTTCCATACCATTTTGTATTTTCTCATATTGGTGCTTAACATTCAGTGTTGTCTCC
CTAGGAAGATTATACATTCCTTGAGGGTGGAAATCATATCTTTATTTCTTAGAAATCATA
TAGAGGCATATTATCTAGCTCAGTGCTGTGTGATGAAGGTAGTTGAGAAAATGTATTCTG
AAAGAATGCATGAACCAAACCTAAAATTCAGGGTGCAGTATGGGGCGGAAATTCACAGTG
AAAAAGCCACAAGAATTTTGCAAATTTTGGAGTTCACTGTTCAGGCATTTCTTATAGCTT
CTCAGATGTTGACATGTGATAGATGAATATCAACTTTCTATCACCTTTGCCATCTAGAAA
ATAATTATATAGTAGGTCCATTATTAGCTACTTAAGAACTAGGTTTTTTTTTTGTTTTGT
TTTGTCTTTTTGCTAtttatttgggctgctcccgcggcatatggaggttcccaggctagg
ggtcgaatcggagctgtagcccccggcctacgccagagccagagcaatgcaggatccgag
ccgtgtctgcaacctacaccacagctcacggcaacgccagatcgttaacccactgagcaa
gggcagggaccgaacccgcactagtcggattcgtttaccactgcgccacgacgggaactc
cTGAATTGAATTTGAATGGGGAAAATCCATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATTTTCCATACCATTTTGTATTTTCTCATATTGGTGCTTAACATTCAGTGTTGTCTCC
CTAGGAAGATTATACATTCCTTGAGGGTGGAAATCATATCTTTATTTCTTAGAAATCATA
TAGAGGCATATTATCTAGCTCAGTGCTGTGTGATGAAGGTAGTTGAGAAAATGTATTCTG
AAAGAATGCATGAACCAAACCTAAAATTCAGGGTGCAGTATGGGGCGGAAATTCACAGTG
AAAAAGCCACAAGAATTTTGCAAATTTTGGAGTTCACTGTTCAGGCATTTCTTATAGCTT
CTCAGATGTTGACATGTGATAGATGAATATCAACTTTCTATCACCTTTGCCATCTAGAAA
ATAATTATATAGTAGGTCCATTATTAGCTACTTAAGAACTAGGTTTTTTTTTTGTTTTGT
TTTGTCTTTTTGCTAtttatttgggctgctcccgcggcatatggaggttcccaggctagg
ggtcgaatcggagctgtagcccccggcctacgccagagccagagcaatgcaggatccgag
ccgtgtctgcaacctacaccacagctcacggcaacgccagatcgttaacccactgagcaa
gggcagggaccgaacccgcactagtcggattcgtttaccactgcgccacgacgggaactc
cTGAATTGAATTTGAATGGGGAAAATCCATTTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-94, + strand, RNAz p=0.986766

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-94, + strand, RNAz p=0.986766

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-268, gnl|bosTau2|chr2 (74096948-74097218)
               

               
               1-268, gnl|Hg17|chr1 (32958393-32959017)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-268, gnl|bosTau2|chr2 (74096948-74097218)
               

               
               1-268, gnl|Hg17|chr1 (32958393-32959017)

	1-268, gnl\|bosTau2\|chr2 (74096948-74097218)
	1-268, gnl\|Hg17\|chr1 (32958393-32959017)