Non-Coding RNA Search

Ova1-OVRM10212C01

Sequence:


               
               ATCGCGGAGGCCCAGAGGCACGCCCTGGGACAGGCGTATGCAGCCCCCCAGAGAGAAAGC
AAACCCCGAAAATGTGGCTTCAGGGACGAAATTTACGAGAGCCTCTCCCAACCGGGGCGC
CTCCCGCGGGGAACGGAGATCCTCTCGCCTCCCCAGGCTCCCTATTCCCTGGTACCGCTG
CGCCCGCTCCCCGAGCCAGCCGGGGTCTAGCTGCAGTCGGCAAGCCAGAGCGGTCGCGGC
GCCGGGCCCCTGGGCACCGAAGAAACCTCAGCTGGTGCACCGCTTCTCCTTCCACCCGGT
GACTTGGGGGAGGGGAGGGCACGCTGCAGAATTGGGGACACTTCTCTCTCTCCCCCAGCC
CCTTGGGCGCTAAGCCTCAGACTCCGTTTACTTTGCGGGGCACGAAGGTGGGGCCCAGTT
CCTGGCTGCTCTCTGCTCCACTTACGGCGACAATGCCTCCTAGCGCCCTGCGCAGCGCAG
TCACGCTCCCTCGGCCGCCGGCGGCGCCCCATGCAACAGCAGCTCGCGGGAGCCGGCCGG
GAGGGGCGCGAAGGGCTGCGGGTTCTGAGCGCGCTGCTGCGGGGCCAGTCGCTGGGCTAG
GAACGGCGCGGGGGCGGGAGCATGCCGCCGAGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCGCGGAGGCCCAGAGGCACGCCCTGGGACAGGCGTATGCAGCCCCCCAGAGAGAAAGC
AAACCCCGAAAATGTGGCTTCAGGGACGAAATTTACGAGAGCCTCTCCCAACCGGGGCGC
CTCCCGCGGGGAACGGAGATCCTCTCGCCTCCCCAGGCTCCCTATTCCCTGGTACCGCTG
CGCCCGCTCCCCGAGCCAGCCGGGGTCTAGCTGCAGTCGGCAAGCCAGAGCGGTCGCGGC
GCCGGGCCCCTGGGCACCGAAGAAACCTCAGCTGGTGCACCGCTTCTCCTTCCACCCGGT
GACTTGGGGGAGGGGAGGGCACGCTGCAGAATTGGGGACACTTCTCTCTCTCCCCCAGCC
CCTTGGGCGCTAAGCCTCAGACTCCGTTTACTTTGCGGGGCACGAAGGTGGGGCCCAGTT
CCTGGCTGCTCTCTGCTCCACTTACGGCGACAATGCCTCCTAGCGCCCTGCGCAGCGCAG
TCACGCTCCCTCGGCCGCCGGCGGCGCCCCATGCAACAGCAGCTCGCGGGAGCCGGCCGG
GAGGGGCGCGAAGGGCTGCGGGTTCTGAGCGCGCTGCTGCGGGGCCAGTCGCTGGGCTAG
GAACGGCGCGGGGGCGGGAGCATGCCGCCGAGTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               7-125, - strand, RNAz p=0.932956

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               7-125, - strand, RNAz p=0.932956

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-635, gnl|bosTau2|chr28 (19229100-19228468)
               

               
               7-635, gnl|Hg17|chr10 (71811861-71812500)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-635, gnl|bosTau2|chr28 (19229100-19228468)
               

               
               7-635, gnl|Hg17|chr10 (71811861-71812500)

	7-635, gnl\|bosTau2\|chr28 (19229100-19228468)
	7-635, gnl\|Hg17\|chr10 (71811861-71812500)