Non-Coding RNA Search

Ova1-OVRM10212D12

Sequence:


               
               ATGTAGGGATAGAGCCAGACAAGTGGGGAATTAAAGTTGGACCTTGACCCTAAGTATATC
TTGCTTGTCAGGGCCTCTGGTAAAGATGGTAGTTTTTGTTATGCACTCATTAGTTCATCT
GGGAATGGGTGAAGAGAAATAAAACTTGCTTTCTTGTTTAACATGAATGAGCCCCTAAAC
TATGCCCAGTAACTTTTCAGCTGCTCTCAACATGTGAGAGATAGAAATTGTCATGTTACA
ATTAAGAAGATTCGTAggagttccctggtagcctaacagttagggatccagcattgtcac
tgttgtggcacaggttgaatccctggcctgggaatttccACGTGCTTCAGGCCTGGCCCA
AAACAAAAAACAAACAAAGATTGCTGGTGTTGATACTGTGCAGGCTAATGTTCTGAGTCC
CTCTGTTGGGTTGGGCTTCATTTTTTTCCCCTTCTTATACTTTAGATTGCCAACATTCTA
GATAGCCATGCAGCTACGTTGAACCGGAAATCTGAACGGGAAGTCTTCTTCATGAACACT
CAGAGCATTGTCCAGCTGGTGCAGAGGTAGTTACACACAACTCAATTCCCAGACCTGCCC
CCTGCCCTGTATCCTCCTTTCTTCTCAGTAGTCACAAGGAGGTTTACCTCAGGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTAGGGATAGAGCCAGACAAGTGGGGAATTAAAGTTGGACCTTGACCCTAAGTATATC
TTGCTTGTCAGGGCCTCTGGTAAAGATGGTAGTTTTTGTTATGCACTCATTAGTTCATCT
GGGAATGGGTGAAGAGAAATAAAACTTGCTTTCTTGTTTAACATGAATGAGCCCCTAAAC
TATGCCCAGTAACTTTTCAGCTGCTCTCAACATGTGAGAGATAGAAATTGTCATGTTACA
ATTAAGAAGATTCGTAggagttccctggtagcctaacagttagggatccagcattgtcac
tgttgtggcacaggttgaatccctggcctgggaatttccACGTGCTTCAGGCCTGGCCCA
AAACAAAAAACAAACAAAGATTGCTGGTGTTGATACTGTGCAGGCTAATGTTCTGAGTCC
CTCTGTTGGGTTGGGCTTCATTTTTTTCCCCTTCTTATACTTTAGATTGCCAACATTCTA
GATAGCCATGCAGCTACGTTGAACCGGAAATCTGAACGGGAAGTCTTCTTCATGAACACT
CAGAGCATTGTCCAGCTGGTGCAGAGGTAGTTACACACAACTCAATTCCCAGACCTGCCC
CCTGCCCTGTATCCTCCTTTCTTCTCAGTAGTCACAAGGAGGTTTACCTCAGGTTT

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               262-334, , RaveNnA Score=26.17

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               262-334, , RaveNnA Score=26.17