Non-Coding RNA Search

Ova1-OVRM10215B05

Sequence:


               
               ATAATTTCACAATCTAATTTTTGCCAGTTTTTTTTTCCAACTCTTTTTCATGGAATAGCT
ACACTGGCTCTCTTGATTTCTCCTTCTTGCTATTTCTATGCCACTCTTGGTAGAATTGCT
AAAGAGTGATTAAGTGATTTTGATACCAAAAGCAGGGAGCCATGAGAAGCATGAAAGCAC
AATCATCTTTTCCCAAAGACACCAGATCAAAGCCAGTAATAGCTCTGCAGCACCAGCCAA
ATCTGCAAAGTCGTGTTAAAGCTGAAAATAGAGCATACTTGCTCCCTGCGGCCTAATGAA
TGAGGCTGCCTTTGCTCAAATGCTTGACATTTCTAACTGAATTTGCTGGACTCAGTCACT
CATTCAGAATAAATTTAATAAAACTTAAAGCAGTGAGTATATACCATGGAAGAAAATACA
AAGCAGTGGAGGGAGAGAGCAAGTGAGAGGTGAGGCACTAGCAAGTATGGGGCCAACAAG
GAACTTTTTGAGTCTGGTGTTTGAGCAGGCATGGGGATGACCGTCACGAAGATGTGGAAT
GAGAGTGCTGAACCTGGGAGTTCCCGCTATATTGCATCAGCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAATTTCACAATCTAATTTTTGCCAGTTTTTTTTTCCAACTCTTTTTCATGGAATAGCT
ACACTGGCTCTCTTGATTTCTCCTTCTTGCTATTTCTATGCCACTCTTGGTAGAATTGCT
AAAGAGTGATTAAGTGATTTTGATACCAAAAGCAGGGAGCCATGAGAAGCATGAAAGCAC
AATCATCTTTTCCCAAAGACACCAGATCAAAGCCAGTAATAGCTCTGCAGCACCAGCCAA
ATCTGCAAAGTCGTGTTAAAGCTGAAAATAGAGCATACTTGCTCCCTGCGGCCTAATGAA
TGAGGCTGCCTTTGCTCAAATGCTTGACATTTCTAACTGAATTTGCTGGACTCAGTCACT
CATTCAGAATAAATTTAATAAAACTTAAAGCAGTGAGTATATACCATGGAAGAAAATACA
AAGCAGTGGAGGGAGAGAGCAAGTGAGAGGTGAGGCACTAGCAAGTATGGGGCCAACAAG
GAACTTTTTGAGTCTGGTGTTTGAGCAGGCATGGGGATGACCGTCACGAAGATGTGGAAT
GAGAGTGCTGAACCTGGGAGTTCCCGCTATATTGCATCAGCTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               80-198, + strand, RNAz p=0.824505

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-198, + strand, RNAz p=0.824505

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-416, gnl|bosTau2|chr15 (41491743-41491330)
               

               
               1-416, gnl|Hg17|chr4 (102318099-102317683)
               

               
               1-416, gnl|Mm7|chr3 (136717249-136717602)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-416, gnl|bosTau2|chr15 (41491743-41491330)
               

               
               1-416, gnl|Hg17|chr4 (102318099-102317683)
               

               
               1-416, gnl|Mm7|chr3 (136717249-136717602)

	1-416, gnl\|bosTau2\|chr15 (41491743-41491330)
	1-416, gnl\|Hg17\|chr4 (102318099-102317683)
	1-416, gnl\|Mm7\|chr3 (136717249-136717602)