Non-Coding RNA Search

Ova1-OVRM10215E07

Sequence:


               
               AGAGCGCAGACAGCGGGCGGACGGGCGGCGGGACGCCGGGACGCGGCGAACAAGGTCATT
ATCCAACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGAATCAGTTGCTGCAATACTC
CGTAACCGATCTCTAGTGGAAGAGGAAGACCAACACATGAAATTGTCCCTTGGAAGCAGC
GAAATGGGCCTCTCTTCCCATTTGCAGTCTTCCAAGGCGGGAACCACACGCATCTTTACC
AGCAATACGCACAGTTCTGTGGTGTTACAGGGGTTTGACCAGCTCCGACTTGAAGGATTG
CTCTGTGATGTGACCCTGATGCCAGGGGACACAGATGACGCCTTCCCTGTGCACAGAGTC
ATGATGGCCTCTGCTAGTGATTACTTCAAGGCCATGTTCACAGGTGGAATGAAAGAACAA
GATTTAATGTGCATTAAGCTTCATGGCGTGAGCAAAGTCGGTTTAAGGAAAATTATTGAT
TTCATTTACACTGCAAAGCTTTCTCTTAATATGGACAACCTTCAAGACACACTGGAAGCT
GCCAGTTTTCTACAGATTCTGCCAGTTTTGGACTTCTGCAAAGTATTTCTCATATCTGGG
GTCACTTTGGACAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGCGCAGACAGCGGGCGGACGGGCGGCGGGACGCCGGGACGCGGCGAACAAGGTCATT
ATCCAACTTTTAGAGGTGATGGATCATCTGCATAGAGGGGAATCAGTTGCTGCAATACTC
CGTAACCGATCTCTAGTGGAAGAGGAAGACCAACACATGAAATTGTCCCTTGGAAGCAGC
GAAATGGGCCTCTCTTCCCATTTGCAGTCTTCCAAGGCGGGAACCACACGCATCTTTACC
AGCAATACGCACAGTTCTGTGGTGTTACAGGGGTTTGACCAGCTCCGACTTGAAGGATTG
CTCTGTGATGTGACCCTGATGCCAGGGGACACAGATGACGCCTTCCCTGTGCACAGAGTC
ATGATGGCCTCTGCTAGTGATTACTTCAAGGCCATGTTCACAGGTGGAATGAAAGAACAA
GATTTAATGTGCATTAAGCTTCATGGCGTGAGCAAAGTCGGTTTAAGGAAAATTATTGAT
TTCATTTACACTGCAAAGCTTTCTCTTAATATGGACAACCTTCAAGACACACTGGAAGCT
GCCAGTTTTCTACAGATTCTGCCAGTTTTGGACTTCTGCAAAGTATTTCTCATATCTGGG
GTCACTTTGGACAATT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61886793|ref|XP_600573.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61886793|ref|XP_600573.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               168-287, + strand, RNAz p=0.909797

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               168-287, + strand, RNAz p=0.909797

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of BC039133, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC039133, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               129-614, gnl|bosTau2|chr8 (12526433-12526917)
               

               
               129-614, gnl|Hg17|chr9 (21324885-21324401)
               

               
               129-614, gnl|Mm7|chr4 (88125755-88125271)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               129-614, gnl|bosTau2|chr8 (12526433-12526917)
               

               
               129-614, gnl|Hg17|chr9 (21324885-21324401)
               

               
               129-614, gnl|Mm7|chr4 (88125755-88125271)

	129-614, gnl\|bosTau2\|chr8 (12526433-12526917)
	129-614, gnl\|Hg17\|chr9 (21324885-21324401)
	129-614, gnl\|Mm7\|chr4 (88125755-88125271)