Non-Coding RNA Search

Ova1-OVRM10218E06

Sequence:


               
               AGTAAATAGAGCAGAGGCATACAGTTCCACTAATCCACCAATGTCCTAAATTTAATGATT
TTAGCAGCTCAAGGAAAACAGGGATTGTTGTAAAACATCACATCCGAATGTGTTATTGCT
TCTAACAATGATTATTTGTCATTTATCTGACACTGAAGGTGTGAACTGCACATTATAGGA
GTCAAAGGTTTTGCATAAAACAAAACAAAGCCTCTTTCTCCAAGGCTTACACTCTGAAAG
CGTGCAAGTGACTCAAGAGAATGTGTCAAAAACCTATGAGAGGCAAAGGGATAATTTATT
TGGAGTTGGCCTTGAAAAGGAGGCATATCCCATAAAGGGTAATAAGGAATGTGTATCTAT
GAACTATTGAAGCATCTCTTAAGGTAAAGTAAATTGTAGAAAAGTCTGGAATCTGCTTTG
GCCACCAATCATATATGATGTAAAACAGTCTCTGACATGCATACATTCCTGCACAATTCC
TTTCAGCAGCTTACAAAGCTTTGGAGGATAAATGGAAAGATGCATTTTACTCTGATTTAT
CTATGGAAGAATTAGGCTTTCAAGCATATTTCTTAATAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTAAATAGAGCAGAGGCATACAGTTCCACTAATCCACCAATGTCCTAAATTTAATGATT
TTAGCAGCTCAAGGAAAACAGGGATTGTTGTAAAACATCACATCCGAATGTGTTATTGCT
TCTAACAATGATTATTTGTCATTTATCTGACACTGAAGGTGTGAACTGCACATTATAGGA
GTCAAAGGTTTTGCATAAAACAAAACAAAGCCTCTTTCTCCAAGGCTTACACTCTGAAAG
CGTGCAAGTGACTCAAGAGAATGTGTCAAAAACCTATGAGAGGCAAAGGGATAATTTATT
TGGAGTTGGCCTTGAAAAGGAGGCATATCCCATAAAGGGTAATAAGGAATGTGTATCTAT
GAACTATTGAAGCATCTCTTAAGGTAAAGTAAATTGTAGAAAAGTCTGGAATCTGCTTTG
GCCACCAATCATATATGATGTAAAACAGTCTCTGACATGCATACATTCCTGCACAATTCC
TTTCAGCAGCTTACAAAGCTTTGGAGGATAAATGGAAAGATGCATTTTACTCTGATTTAT
CTATGGAAGAATTAGGCTTTCAAGCATATTTCTTAATAAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               120-274, no strand, RNAz p=0.976275

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-274, no strand, RNAz p=0.976275

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-581, gnl|bosTau2|chr5 (38840368-38839788)
               

               
               1-581, gnl|Hg17|chr12 (97245028-97244445)
               

               
               1-581, gnl|Mm7|chr10 (90888727-90889305)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-581, gnl|bosTau2|chr5 (38840368-38839788)
               

               
               1-581, gnl|Hg17|chr12 (97245028-97244445)
               

               
               1-581, gnl|Mm7|chr10 (90888727-90889305)

	1-581, gnl\|bosTau2\|chr5 (38840368-38839788)
	1-581, gnl\|Hg17\|chr12 (97245028-97244445)
	1-581, gnl\|Mm7\|chr10 (90888727-90889305)