Non-Coding RNA Search

Ova1-OVRM10221E12

Sequence:


               
               CTGTTACAAGATACAGCTGTGCTGTGGTCTAGGAAGGTTTTTAGTGACAGCGATAAATAT
GAAAAACTGACCATCCATCTCCTTTGGTCTACCTGCTCTGTGGTTATCATTTCCATGCAG
AGTAATAGGGACAGCTCCTTCCCCTCAGGATTCATCTAGAAAATAGGACATGCCATGATA
GTCCTAATAAGCAGGCCCCAGTGTTAGCATCCTTTTGAAGTCCTTTTGTAATGAGAACAA
AGGAAACATACTCAGTTGAATTCTGCTTTGAGGCCATATAATGAGGGACACAGAATATTT
CAATTCAAAGCAAGATGGTAGCATTGAAAGGAAATATGTCCGTACTGTGTAAAGGCGGAA
GGTAATGACCCATCCCCTGCTGAGAGGGAGCACTGGCTATACTGTAAATCACTGGCTGTT
GACCACTGTGAGCACTCTCTGCTCTTTGTGGTTTCAGGCTCAGGGGATGGAGAAAAACTG
CATCTCCTCTCCTTGCTCTCATTTTATAGGTGGTCAACGTCACTGGCAACCAGGACATCT
GCTACTACAACTTCCTCTGTGCTCATCCCTTGGGCGTCCTGAGTGCCTTCAACAACATTC
TCAGTAACCTGGGCCACGTGCTCCTGGGCTGCCTCTTCCTGCTGATAGTCTTGCGCCGGG
ATATTCTCCATCGAAGAGCCCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTTACAAGATACAGCTGTGCTGTGGTCTAGGAAGGTTTTTAGTGACAGCGATAAATAT
GAAAAACTGACCATCCATCTCCTTTGGTCTACCTGCTCTGTGGTTATCATTTCCATGCAG
AGTAATAGGGACAGCTCCTTCCCCTCAGGATTCATCTAGAAAATAGGACATGCCATGATA
GTCCTAATAAGCAGGCCCCAGTGTTAGCATCCTTTTGAAGTCCTTTTGTAATGAGAACAA
AGGAAACATACTCAGTTGAATTCTGCTTTGAGGCCATATAATGAGGGACACAGAATATTT
CAATTCAAAGCAAGATGGTAGCATTGAAAGGAAATATGTCCGTACTGTGTAAAGGCGGAA
GGTAATGACCCATCCCCTGCTGAGAGGGAGCACTGGCTATACTGTAAATCACTGGCTGTT
GACCACTGTGAGCACTCTCTGCTCTTTGTGGTTTCAGGCTCAGGGGATGGAGAAAAACTG
CATCTCCTCTCCTTGCTCTCATTTTATAGGTGGTCAACGTCACTGGCAACCAGGACATCT
GCTACTACAACTTCCTCTGTGCTCATCCCTTGGGCGTCCTGAGTGCCTTCAACAACATTC
TCAGTAACCTGGGCCACGTGCTCCTGGGCTGCCTCTTCCTGCTGATAGTCTTGCGCCGGG
ATATTCTCCATCGAAGAGCCCTGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               372-493, + strand, RNAz p=0.998948

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               372-493, + strand, RNAz p=0.998948

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               21-493, gnl|bosTau2|chr1 (34843698-34843225)
               

               
               21-493, gnl|Hg17|chr3 (114808091-114808515)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-493, gnl|bosTau2|chr1 (34843698-34843225)
               

               
               21-493, gnl|Hg17|chr3 (114808091-114808515)

	21-493, gnl\|bosTau2\|chr1 (34843698-34843225)
	21-493, gnl\|Hg17\|chr3 (114808091-114808515)