Ova1-OVRM1B020179
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTTGATCCCAAATCCGTTTCCTTGTGGGAGTCCGGACATGTTCATAAACTCATTATGTA GCCAGTTCCCCACTAAGAGGGTAACACCTCTGATAAGCCTTTGTTTTTATTATCATTAAA ATAGCTATAAACTTAGTACAGTGCTTATGCATGCCAGAGCTCTCCTGATAACTGCCTTTT GAAGTAGATACTGTTTTTATCCCAATTCCACAGCTAAGGCGCAGAGAGATTCCTTAACTT ACTCAAGGCCACAGTTATGAATGGAAAAGTTGGGGCTTGAACCCAGGCCCCCAGACCCTG TTCCTCTTTAACCACCACGTTCCACTATCTCACAATGGTTTTGAAAAAAATATTAATCAA AGTAGCTAATACTTACTTTGCATGTCTTATTTCCCTACCACAACCCTGTGGAGTAGGTAC AGACCTTCCCATGTTATCAATGATGAAACTGAGGCCCAGAGGATTTAGGAATTCTACCCA AGTTCCACAGTCCCTAAGAGGCAGAAATATATTTTGAGTTTTTTTTTTTTTCTTTTTTTT CTTTTTTCCCAGACAGATTTGAAATGCTAGTGTGCCTTAAATTTAACTTGGAAGCCCAGG ATGGGTGATAACTAATTTCTAAATCAGGCTTTCATTGACTGTGATGTTCTTCACCATAGA TTTATATTAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTTGATCCCAAATCCGTTTCCTTGTGGGAGTCCGGACATGTTCATAAACTCATTATGTA GCCAGTTCCCCACTAAGAGGGTAACACCTCTGATAAGCCTTTGTTTTTATTATCATTAAA ATAGCTATAAACTTAGTACAGTGCTTATGCATGCCAGAGCTCTCCTGATAACTGCCTTTT GAAGTAGATACTGTTTTTATCCCAATTCCACAGCTAAGGCGCAGAGAGATTCCTTAACTT ACTCAAGGCCACAGTTATGAATGGAAAAGTTGGGGCTTGAACCCAGGCCCCCAGACCCTG TTCCTCTTTAACCACCACGTTCCACTATCTCACAATGGTTTTGAAAAAAATATTAATCAA AGTAGCTAATACTTACTTTGCATGTCTTATTTCCCTACCACAACCCTGTGGAGTAGGTAC AGACCTTCCCATGTTATCAATGATGAAACTGAGGCCCAGAGGATTTAGGAATTCTACCCA AGTTCCACAGTCCCTAAGAGGCAGAAATATATTTTGAGTTTTTTTTTTTTTCTTTTTTTT CTTTTTTCCCAGACAGATTTGAAATGCTAGTGTGCCTTAAATTTAACTTGGAAGCCCAGG ATGGGTGATAACTAATTTCTAAATCAGGCTTTCATTGACTGTGATGTTCTTCACCATAGA TTTATATTAAAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 242-361, - strand, RNAz p=0.810464 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 242-361, - strand, RNAz p=0.810464 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-378, gnl|bosTau2|chr26 (25987736-25987362) | |
| 2-378, gnl|canFam2|chr28 (32446675-32446978) | |
| 2-378, gnl|dasNov1|scaffold_123830 (9049-8696) | |
| 2-378, gnl|hg17|chr10 (120983453-120983771) | |
| 2-378, gnl|Hg17|chr10 (120983495-120983890) | |
| 2-378, gnl|loxAfr1|scaffold_502 (36169-35838) | |
| 2-378, gnl|mm7|chr19 (60838641-60838939) | |
| 2-378, gnl|Mm7|chr19 (60838680-60839014) | |
| 2-378, gnl|oryCun1|scaffold_209931 (86770-86513) | |
| 2-378, gnl|panTro1|chr8 (123250826-123251144) | |
| 2-378, gnl|rheMac2|chr9 (118856200-118856518) | |
| 2-378, gnl|rn3|chr1 (267735737-267736019) | |
| 422-671, gnl|bosTau2|chr26 (25987049-25986812) | |
| 422-671, gnl|canFam2|chr28 (32447146-32447314) | |
| 422-671, gnl|dasNov1|scaffold_123830 (8528-8368) | |
| 422-671, gnl|echTel1|scaffold_297356 (87796-87960) | |
| 422-671, gnl|hg17|chr10 (120983931-120984102) | |
| 422-671, gnl|Hg17|chr10 (120983930-120984769) | |
| 422-671, gnl|loxAfr1|scaffold_502 (35316-35155) | |
| 422-671, gnl|mm7|chr19 (60839652-60839820) | |
| 422-671, gnl|Mm7|chr19 (60839650-60839873) | |
| 422-671, gnl|oryCun1|scaffold_209931 (86344-86189) | |
| 422-671, gnl|panTro1|chr8 (123251304-123251475) | |
| 422-671, gnl|rheMac2|chr9 (118856678-118856849) | |
| 422-671, gnl|rn3|chr1 (267736736-267736904) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-378, gnl|bosTau2|chr26 (25987736-25987362) | |
| 2-378, gnl|canFam2|chr28 (32446675-32446978) | |
| 2-378, gnl|dasNov1|scaffold_123830 (9049-8696) | |
| 2-378, gnl|hg17|chr10 (120983453-120983771) | |
| 2-378, gnl|Hg17|chr10 (120983495-120983890) | |
| 2-378, gnl|loxAfr1|scaffold_502 (36169-35838) | |
| 2-378, gnl|mm7|chr19 (60838641-60838939) | |
| 2-378, gnl|Mm7|chr19 (60838680-60839014) | |
| 2-378, gnl|oryCun1|scaffold_209931 (86770-86513) | |
| 2-378, gnl|panTro1|chr8 (123250826-123251144) | |
| 2-378, gnl|rheMac2|chr9 (118856200-118856518) | |
| 2-378, gnl|rn3|chr1 (267735737-267736019) | |
| 422-671, gnl|bosTau2|chr26 (25987049-25986812) | |
| 422-671, gnl|canFam2|chr28 (32447146-32447314) | |
| 422-671, gnl|dasNov1|scaffold_123830 (8528-8368) | |
| 422-671, gnl|echTel1|scaffold_297356 (87796-87960) | |
| 422-671, gnl|hg17|chr10 (120983931-120984102) | |
| 422-671, gnl|Hg17|chr10 (120983930-120984769) | |
| 422-671, gnl|loxAfr1|scaffold_502 (35316-35155) | |
| 422-671, gnl|mm7|chr19 (60839652-60839820) | |
| 422-671, gnl|Mm7|chr19 (60839650-60839873) | |
| 422-671, gnl|oryCun1|scaffold_209931 (86344-86189) | |
| 422-671, gnl|panTro1|chr8 (123251304-123251475) | |
| 422-671, gnl|rheMac2|chr9 (118856678-118856849) | |
| 422-671, gnl|rn3|chr1 (267736736-267736904) |