Non-Coding RNA Search

Ova2-C0003105_C11

Sequence:


               
               CCACCGTGAGGTGGCCCAGGTCCTAATCCGAGAGGGCCGCTGCGATGTGAATGTGCGAAA
CAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGCAGCAGGCCCACCTGGGGCTCGTACC
GCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGATGAGGAGGGTGACACAGCCCT
GCATATGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCTGACAGGGCTGGGGGAGA
CCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCCCAGGCAGCACAGA
GTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGATGTGAGCTA
CGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACCGTGAGGTGGCCCAGGTCCTAATCCGAGAGGGCCGCTGCGATGTGAATGTGCGAAA
CAGGAAGCTTCAATCCCCACTGCATCTGGCTGTGCAGCAGGCCCACCTGGGGCTCGTACC
GCTGCTGGTGGACGCTGGCTGCAATGTCAACACTGAGGATGAGGAGGGTGACACAGCCCT
GCATATGGCACTACAGCGTCATCAGCTGCTGCCCCTGGTGGCTGACAGGGCTGGGGGAGA
CCCAGGGCCCTTGCAGCTGCTGTCAAGGTTACAGGCCTCAGGCCTCCCAGGCAGCACAGA
GTTGACTGTAGGCGCCGCAGTGGCCTGCTTCCTGGCATTGGAGGGTGCTGATGTGAGCTA
CGCAAACCACCGCGGCCGGAGCCCACTGGACCTGGCCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               150-268, + strand, RNAz p=0.95465

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               150-268, + strand, RNAz p=0.95465

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               108-234, - strand, RNAmicro p=0.913422

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               108-234, - strand, RNAmicro p=0.913422

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               33-268, gnl|bosTau2|chr16 (37695510-37695275)
               

               
               33-268, gnl|Hg17|chr1_random (1262322-1262557)
               

               
               33-268, gnl|Mm7|chr4 (154645849-154645614)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-268, gnl|bosTau2|chr16 (37695510-37695275)
               

               
               33-268, gnl|Hg17|chr1_random (1262322-1262557)
               

               
               33-268, gnl|Mm7|chr4 (154645849-154645614)

	33-268, gnl\|bosTau2\|chr16 (37695510-37695275)
	33-268, gnl\|Hg17\|chr1_random (1262322-1262557)
	33-268, gnl\|Mm7\|chr4 (154645849-154645614)