Non-Coding RNA Search

Ova2-C0003105_C14

Sequence:


               
               TGGCAAGCGTCGTCAGAAGGAGCATCGGAGGCACACACGGACCTGTATGGACAGTGTGGG
TCGCAGGCCCCGCGAGGGGAGGGACAAGGCCAAGGCCAAGGCTCCCAAAGAAAAAAGCCG
AAGGGTGCTGGGGAACTTGGACTTGCAGAGTGAATAGATCCAGGGACGGGAGAAGGTCCG
GACTGATGTAAGTGGGGCTTCCAAAGTCAAGACGCCCACAACTCCAGCGCCCCCACCTGC
TCCTGCCCCCTCTGCTCAGCCAACACCCCCATCAGCTCCTGTCCCTGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCAAGCGTCGTCAGAAGGAGCATCGGAGGCACACACGGACCTGTATGGACAGTGTGGG
TCGCAGGCCCCGCGAGGGGAGGGACAAGGCCAAGGCCAAGGCTCCCAAAGAAAAAAGCCG
AAGGGTGCTGGGGAACTTGGACTTGCAGAGTGAATAGATCCAGGGACGGGAGAAGGTCCG
GACTGATGTAAGTGGGGCTTCCAAAGTCAAGACGCCCACAACTCCAGCGCCCCCACCTGC
TCCTGCCCCCTCTGCTCAGCCAACACCCCCATCAGCTCCTGTCCCTGGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               53-212, - strand, RNAz p=0.975906

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               53-212, - strand, RNAz p=0.975906

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-290, gnl|bosTau2|chr19 (15383928-15383652)
               

               
               14-290, gnl|Hg17|chr17 (7693269-7693545)
               

               
               14-290, gnl|Mm7|chr11 (69486070-69485806)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-290, gnl|bosTau2|chr19 (15383928-15383652)
               

               
               14-290, gnl|Hg17|chr17 (7693269-7693545)
               

               
               14-290, gnl|Mm7|chr11 (69486070-69485806)

	14-290, gnl\|bosTau2\|chr19 (15383928-15383652)
	14-290, gnl\|Hg17\|chr17 (7693269-7693545)
	14-290, gnl\|Mm7\|chr11 (69486070-69485806)