Ova2-C0003105_F08
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATGAACCCCAGTTCCCACACCCACCCTGGACATGCACAGCAAACTTCTTCAGTCAATGG CCGTGCCCTGCCCCATGTGGTGAACACCATGCCTCACACATCTGCCATGAACCGCTTGAC CCCAGTGAAGACACCTTTACAAGTGCCTCTGTCCCACCCCATGCAGATGAGTGCCCTGGG CAACTACTCCTCTGTGAGCAGCTGCAATGGCTATGGTAGGATGGGTGTCCTCCACCAGGA GAAGCTCCCAAGTGACTTGGATGGCATGTTTATTGAGCGCTTGGACTGTGACATGGAGTC CATCATTCGGAACGACCTCATGGACGGAGATACCTTGGATTTTAACTTTGATAATGTGTT GCCCAACCAAAGCTTCCCGCACAGTGTCAAGACTACAACACACAGCTGGGTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATGAACCCCAGTTCCCACACCCACCCTGGACATGCACAGCAAACTTCTTCAGTCAATGG CCGTGCCCTGCCCCATGTGGTGAACACCATGCCTCACACATCTGCCATGAACCGCTTGAC CCCAGTGAAGACACCTTTACAAGTGCCTCTGTCCCACCCCATGCAGATGAGTGCCCTGGG CAACTACTCCTCTGTGAGCAGCTGCAATGGCTATGGTAGGATGGGTGTCCTCCACCAGGA GAAGCTCCCAAGTGACTTGGATGGCATGTTTATTGAGCGCTTGGACTGTGACATGGAGTC CATCATTCGGAACGACCTCATGGACGGAGATACCTTGGATTTTAACTTTGATAATGTGTT GCCCAACCAAAGCTTCCCGCACAGTGTCAAGACTACAACACACAGCTGGGTGTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 120-279, - strand, RNAz p=0.987187 | |
| 204-313, + strand, RNAz p=0.627205 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 120-279, - strand, RNAz p=0.987187 | |
| 204-313, + strand, RNAz p=0.627205 |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 1-414, gnl|bosTau2|chr12 (9366806-9367219) | |
| 1-414, gnl|canFam2|chr25 (3687641-3687103) | |
| 1-414, gnl|danRer3|chrNA (183089796-183089266) | |
| 1-414, gnl|dasNov1|scaffold_63869 (5817-6348) | |
| 1-414, gnl|echTel1|scaffold_289543 (41789-41260) | |
| 1-414, gnl|fr1|chrUn (54616507-54615984) | |
| 1-414, gnl|galGal2|chr1 (162742698-162742159) | |
| 1-414, gnl|hg17|chr13 (40031638-40032172) | |
| 1-414, gnl|Hg17|chr13 (40032080-40031667) | |
| 1-414, gnl|loxAfr1|scaffold_2204 (54988-55525) | |
| 1-414, gnl|mm7|chr3 (52472926-52472392) | |
| 1-414, gnl|Mm7|chr3 (52472482-52472895) | |
| 1-414, gnl|monDom2|scaffold_15 (53433412-53433943) | |
| 1-414, gnl|oryCun1|scaffold_175936 (32569-33103) | |
| 1-414, gnl|panTro1|chr14_random (10038046-10038580) | |
| 1-414, gnl|rheMac2|chr17 (19617421-19617955) | |
| 1-414, gnl|rn3|chr2 (141152308-141151774) | |
| 1-414, gnl|tetNig1|chr16 (5944324-5944843) | |
| 1-414, gnl|xenTro1|scaffold_223 (845224-845717) | |
| 236-352, gnl|bosTau2|chr11 (81514240-81514359) | |
| 236-352, gnl|canFam2|chr12 (68687999-68687828) | |
| 236-352, gnl|canFam2|chr12 (68687831-68687999) | |
| 236-352, gnl|danRer3|chr20 (28674866-28674682) | |
| 236-352, gnl|danRer3|chrUn (178957502-178957310) | |
| 236-352, gnl|dasNov1|scaffold_7209 (80697-80526) | |
| 236-352, gnl|dasNov1|scaffold_7209 (80529-80697) | |
| 236-352, gnl|echTel1|scaffold_312052 (142087-141907) | |
| 236-352, gnl|echTel1|scaffold_312052 (141907-142087) | |
| 236-352, gnl|fr1|chrUn (2518642-2518805) | |
| 236-352, gnl|fr1|chrUn (2518795-2518642) | |
| 236-352, gnl|galGal2|chr3 (65704426-65704597) | |
| 236-352, gnl|galGal2|chr3 (65704594-65704426) | |
| 236-352, gnl|hg17|chr17 (18515004-18515175) | |
| 236-352, gnl|hg17|chr6 (109092523-109092691) | |
| 236-352, gnl|Hg17|chr6 (109092539-109092658) | |
| 236-352, gnl|loxAfr1|scaffold_44 (27020-27191) | |
| 236-352, gnl|loxAfr1|scaffold_44 (27188-27020) | |
| 236-352, gnl|mm7|chr10 (42007224-42007395) | |
| 236-352, gnl|mm7|chr10 (42007392-42007224) | |
| 236-352, gnl|Mm7|chr10 (42007374-42007255) | |
| 236-352, gnl|monDom2|scaffold_0 (111841663-111841834) | |
| 236-352, gnl|monDom2|scaffold_0 (111841831-111841663) | |
| 236-352, gnl|oryCun1|scaffold_212162 (153802-153976) | |
| 236-352, gnl|oryCun1|scaffold_212162 (153973-153802) | |
| 236-352, gnl|panTro1|chr5 (111400209-111400038) | |
| 236-352, gnl|panTro1|chr5 (111400041-111400209) | |
| 236-352, gnl|rheMac2|chr4 (155231744-155231915) | |
| 236-352, gnl|rheMac2|chr4 (155231912-155231744) | |
| 236-352, gnl|rn3|chr20 (46206901-46207072) | |
| 236-352, gnl|rn3|chr20 (46207069-46206901) | |
| 236-352, gnl|tetNig1|chr10 (11105622-11105785) | |
| 236-352, gnl|tetNig1|chr14 (3396310-3396150) | |
| 236-352, gnl|xenTro1|scaffold_1737 (35222-35054) | |
| 236-352, gnl|xenTro1|scaffold_1737 (35057-35222) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-414, gnl|bosTau2|chr12 (9366806-9367219) | |
| 1-414, gnl|canFam2|chr25 (3687641-3687103) | |
| 1-414, gnl|danRer3|chrNA (183089796-183089266) | |
| 1-414, gnl|dasNov1|scaffold_63869 (5817-6348) | |
| 1-414, gnl|echTel1|scaffold_289543 (41789-41260) | |
| 1-414, gnl|fr1|chrUn (54616507-54615984) | |
| 1-414, gnl|galGal2|chr1 (162742698-162742159) | |
| 1-414, gnl|hg17|chr13 (40031638-40032172) | |
| 1-414, gnl|Hg17|chr13 (40032080-40031667) | |
| 1-414, gnl|loxAfr1|scaffold_2204 (54988-55525) | |
| 1-414, gnl|mm7|chr3 (52472926-52472392) | |
| 1-414, gnl|Mm7|chr3 (52472482-52472895) | |
| 1-414, gnl|monDom2|scaffold_15 (53433412-53433943) | |
| 1-414, gnl|oryCun1|scaffold_175936 (32569-33103) | |
| 1-414, gnl|panTro1|chr14_random (10038046-10038580) | |
| 1-414, gnl|rheMac2|chr17 (19617421-19617955) | |
| 1-414, gnl|rn3|chr2 (141152308-141151774) | |
| 1-414, gnl|tetNig1|chr16 (5944324-5944843) | |
| 1-414, gnl|xenTro1|scaffold_223 (845224-845717) | |
| 236-352, gnl|bosTau2|chr11 (81514240-81514359) | |
| 236-352, gnl|canFam2|chr12 (68687999-68687828) | |
| 236-352, gnl|canFam2|chr12 (68687831-68687999) | |
| 236-352, gnl|danRer3|chr20 (28674866-28674682) | |
| 236-352, gnl|danRer3|chrUn (178957502-178957310) | |
| 236-352, gnl|dasNov1|scaffold_7209 (80697-80526) | |
| 236-352, gnl|dasNov1|scaffold_7209 (80529-80697) | |
| 236-352, gnl|echTel1|scaffold_312052 (142087-141907) | |
| 236-352, gnl|echTel1|scaffold_312052 (141907-142087) | |
| 236-352, gnl|fr1|chrUn (2518642-2518805) | |
| 236-352, gnl|fr1|chrUn (2518795-2518642) | |
| 236-352, gnl|galGal2|chr3 (65704426-65704597) | |
| 236-352, gnl|galGal2|chr3 (65704594-65704426) | |
| 236-352, gnl|hg17|chr17 (18515004-18515175) | |
| 236-352, gnl|hg17|chr6 (109092523-109092691) | |
| 236-352, gnl|Hg17|chr6 (109092539-109092658) | |
| 236-352, gnl|loxAfr1|scaffold_44 (27020-27191) | |
| 236-352, gnl|loxAfr1|scaffold_44 (27188-27020) | |
| 236-352, gnl|mm7|chr10 (42007224-42007395) | |
| 236-352, gnl|mm7|chr10 (42007392-42007224) | |
| 236-352, gnl|Mm7|chr10 (42007374-42007255) | |
| 236-352, gnl|monDom2|scaffold_0 (111841663-111841834) | |
| 236-352, gnl|monDom2|scaffold_0 (111841831-111841663) | |
| 236-352, gnl|oryCun1|scaffold_212162 (153802-153976) | |
| 236-352, gnl|oryCun1|scaffold_212162 (153973-153802) | |
| 236-352, gnl|panTro1|chr5 (111400209-111400038) | |
| 236-352, gnl|panTro1|chr5 (111400041-111400209) | |
| 236-352, gnl|rheMac2|chr4 (155231744-155231915) | |
| 236-352, gnl|rheMac2|chr4 (155231912-155231744) | |
| 236-352, gnl|rn3|chr20 (46206901-46207072) | |
| 236-352, gnl|rn3|chr20 (46207069-46206901) | |
| 236-352, gnl|tetNig1|chr10 (11105622-11105785) | |
| 236-352, gnl|tetNig1|chr14 (3396310-3396150) | |
| 236-352, gnl|xenTro1|scaffold_1737 (35222-35054) | |
| 236-352, gnl|xenTro1|scaffold_1737 (35057-35222) |