Non-Coding RNA Search

Ova2-C0003105_I06

Sequence:


               
               CCCGCGGTGGCGGCCGCGGCTCGAGCTTTCCAGCCAGGATGCAACATTGGAGAAGCCATT
CGTGTAATTGCAGAGAAAGGGCTTGGAGATGTGGACCAGCTGGTGAAGTGCTCGCATGAG
CGCTCCATCCATCTCTTCATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATAC
AGGTGCAATTCCAAGGAGGCCTTTGAGAAAGGGCTCTGCCTGAGTTGCAGAAAGAATCGC
TGTAACAACGTGGGCTATGAGATCAACAAGGTCAGAGCCAAGAGAAGCAGTAAGATGTAC
CTGAAGACTCGCTCTCAGATGCCCTACAAAGTATTCCATTACCAAGTCAAGATTCACTTT
TCTGGAACTGAGAATGACAAGCAAAACAACCAGGCCTTCGAGATTTCTCTGTATGGCACA
GTGGCTGAAAGTGAGAACATTCCCTTCACCCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGCGGTGGCGGCCGCGGCTCGAGCTTTCCAGCCAGGATGCAACATTGGAGAAGCCATT
CGTGTAATTGCAGAGAAAGGGCTTGGAGATGTGGACCAGCTGGTGAAGTGCTCGCATGAG
CGCTCCATCCATCTCTTCATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATAC
AGGTGCAATTCCAAGGAGGCCTTTGAGAAAGGGCTCTGCCTGAGTTGCAGAAAGAATCGC
TGTAACAACGTGGGCTATGAGATCAACAAGGTCAGAGCCAAGAGAAGCAGTAAGATGTAC
CTGAAGACTCGCTCTCAGATGCCCTACAAAGTATTCCATTACCAAGTCAAGATTCACTTT
TCTGGAACTGAGAATGACAAGCAAAACAACCAGGCCTTCGAGATTTCTCTGTATGGCACA
GTGGCTGAAAGTGAGAACATTCCCTTCACCCTGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q95KX1_CANFA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q95KX1_CANFA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               166-325, + strand, RNAz p=0.843826

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               166-325, + strand, RNAz p=0.843826

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               87-331, gnl|bosTau2|chr8 (35883993-35884237)
               

               
               87-331, gnl|Hg17|chr8 (19857630-19857874)
               

               
               87-331, gnl|Mm7|chr8 (67351355-67351599)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               87-331, gnl|bosTau2|chr8 (35883993-35884237)
               

               
               87-331, gnl|Hg17|chr8 (19857630-19857874)
               

               
               87-331, gnl|Mm7|chr8 (67351355-67351599)

	87-331, gnl\|bosTau2\|chr8 (35883993-35884237)
	87-331, gnl\|Hg17\|chr8 (19857630-19857874)
	87-331, gnl\|Mm7\|chr8 (67351355-67351599)