Ova2-C0003260_E05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTTGCCGGAAACGCTGCTCCGCTTTACCTGGGTTCAGCATCTCTAGATCGAATCCGGAC ACCGACAAAATGCCGGCTTACCACTCTTCTCTCATGGACCCTGACACCAAGCTCATTGGC AACATGGCACTGCTGCCCATCCGAAGCCAGTTCAAAGGACCCGCCCCTCGAGAGACGAAA GACACGGATATTGTGGATGAAGCCATCTATTACTTCAAGGCCAACGTCTTCTTCAAGAAC TATGAAATTAAGAATGAAGCGGACAGGACCTTGATCTACATCACACTCTACATTTCTGAG TGTCTAAAGAAGCTCCAAAAGTGCAACTCCAGAAGCCAAGGCGAGAAAGAAATGTACACG CTAGGAATCACCAACTTTCCCATTCCTGGCGAGCCTGGCTTTCCCCTCAACGCCATTTAC GCCAAACCTGCCAGCAAACAGGAGGATGAAACGATGCGCGCGTACCTACAGCAGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTTGCCGGAAACGCTGCTCCGCTTTACCTGGGTTCAGCATCTCTAGATCGAATCCGGAC ACCGACAAAATGCCGGCTTACCACTCTTCTCTCATGGACCCTGACACCAAGCTCATTGGC AACATGGCACTGCTGCCCATCCGAAGCCAGTTCAAAGGACCCGCCCCTCGAGAGACGAAA GACACGGATATTGTGGATGAAGCCATCTATTACTTCAAGGCCAACGTCTTCTTCAAGAAC TATGAAATTAAGAATGAAGCGGACAGGACCTTGATCTACATCACACTCTACATTTCTGAG TGTCTAAAGAAGCTCCAAAAGTGCAACTCCAGAAGCCAAGGCGAGAAAGAAATGTACACG CTAGGAATCACCAACTTTCCCATTCCTGGCGAGCCTGGCTTTCCCCTCAACGCCATTTAC GCCAAACCTGCCAGCAAACAGGAGGATGAAACGATGCGCGCGTACCTACAGCAGCTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 176-282, - strand, RNAz p=0.662391 | |
| 323-440, - strand, RNAz p=0.514002 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 176-282, - strand, RNAz p=0.662391 | |
| 323-440, - strand, RNAz p=0.514002 |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 57-477, gnl|bosTau2|chr5 (26828587-26829007) | |
| 57-477, gnl|Hg17|chr11 (93561824-93561392) | |
| 75-184, gnl|bosTau2|chr17 (30271680-30271788) | |
| 75-184, gnl|canFam2|chr26 (11292615-11292728) | |
| 75-184, gnl|danRer3|chr21 (7190099-7190212) | |
| 75-184, gnl|dasNov1|scaffold_26191 (41187-41299) | |
| 75-184, gnl|echTel1|scaffold_312394 (198487-198375) | |
| 75-184, gnl|fr1|chrUn (292381053-292380941) | |
| 75-184, gnl|galGal2|chr15 (5237842-5237733) | |
| 75-184, gnl|hg17|chr12 (109345970-109346083) | |
| 75-184, gnl|Hg17|chr12 (109346077-109345969) | |
| 75-184, gnl|loxAfr1|scaffold_8228 (9599-9712) | |
| 75-184, gnl|mm7|chr5 (121631146-121631035) | |
| 75-184, gnl|Mm7|chr5 (121631038-121631144) | |
| 75-184, gnl|monDom2|scaffold_97 (917482-917369) | |
| 75-184, gnl|oryCun1|scaffold_106916 (9894-10006) | |
| 75-184, gnl|panTro1|chr10_random (3201555-3201442) | |
| 75-184, gnl|rheMac2|chr11 (111375838-111375951) | |
| 75-184, gnl|rn3|chr12 (35240389-35240501) | |
| 75-184, gnl|tetNig1|chrUn_random (90795370-90795483) | |
| 75-184, gnl|xenTro1|scaffold_501 (513805-513692) | |
| 319-448, gnl|bosTau2|chr17 (30278469-30278598) | |
| 319-448, gnl|canFam2|chr26 (11287054-11287214) | |
| 319-448, gnl|danRer3|chr21 (7187411-7187566) | |
| 319-448, gnl|dasNov1|scaffold_26191 (32776-32941) | |
| 319-448, gnl|echTel1|scaffold_312394 (205732-205573) | |
| 319-448, gnl|fr1|chrUn (292381773-292381629) | |
| 319-448, gnl|galGal2|chr15 (5239570-5239433) | |
| 319-448, gnl|hg17|chr12 (109337066-109337227) | |
| 319-448, gnl|Hg17|chr12 (109337211-109337082) | |
| 319-448, gnl|loxAfr1|scaffold_8228 (1986-2147) | |
| 319-448, gnl|mm7|chr5 (121638490-121638336) | |
| 319-448, gnl|Mm7|chr5 (121638343-121638472) | |
| 319-448, gnl|monDom2|scaffold_97 (922926-922770) | |
| 319-448, gnl|oryCun1|scaffold_106916 (1425-1599) | |
| 319-448, gnl|panTro1|chr10 (111916082-111916249) | |
| 319-448, gnl|rheMac2|chr11 (111366410-111366577) | |
| 319-448, gnl|rn3|chr12 (35232429-35232583) | |
| 319-448, gnl|tetNig1|chrUn_random (90794573-90794709) | |
| 319-448, gnl|xenTro1|scaffold_501 (515584-515436) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 57-477, gnl|bosTau2|chr5 (26828587-26829007) | |
| 57-477, gnl|Hg17|chr11 (93561824-93561392) | |
| 75-184, gnl|bosTau2|chr17 (30271680-30271788) | |
| 75-184, gnl|canFam2|chr26 (11292615-11292728) | |
| 75-184, gnl|danRer3|chr21 (7190099-7190212) | |
| 75-184, gnl|dasNov1|scaffold_26191 (41187-41299) | |
| 75-184, gnl|echTel1|scaffold_312394 (198487-198375) | |
| 75-184, gnl|fr1|chrUn (292381053-292380941) | |
| 75-184, gnl|galGal2|chr15 (5237842-5237733) | |
| 75-184, gnl|hg17|chr12 (109345970-109346083) | |
| 75-184, gnl|Hg17|chr12 (109346077-109345969) | |
| 75-184, gnl|loxAfr1|scaffold_8228 (9599-9712) | |
| 75-184, gnl|mm7|chr5 (121631146-121631035) | |
| 75-184, gnl|Mm7|chr5 (121631038-121631144) | |
| 75-184, gnl|monDom2|scaffold_97 (917482-917369) | |
| 75-184, gnl|oryCun1|scaffold_106916 (9894-10006) | |
| 75-184, gnl|panTro1|chr10_random (3201555-3201442) | |
| 75-184, gnl|rheMac2|chr11 (111375838-111375951) | |
| 75-184, gnl|rn3|chr12 (35240389-35240501) | |
| 75-184, gnl|tetNig1|chrUn_random (90795370-90795483) | |
| 75-184, gnl|xenTro1|scaffold_501 (513805-513692) | |
| 319-448, gnl|bosTau2|chr17 (30278469-30278598) | |
| 319-448, gnl|canFam2|chr26 (11287054-11287214) | |
| 319-448, gnl|danRer3|chr21 (7187411-7187566) | |
| 319-448, gnl|dasNov1|scaffold_26191 (32776-32941) | |
| 319-448, gnl|echTel1|scaffold_312394 (205732-205573) | |
| 319-448, gnl|fr1|chrUn (292381773-292381629) | |
| 319-448, gnl|galGal2|chr15 (5239570-5239433) | |
| 319-448, gnl|hg17|chr12 (109337066-109337227) | |
| 319-448, gnl|Hg17|chr12 (109337211-109337082) | |
| 319-448, gnl|loxAfr1|scaffold_8228 (1986-2147) | |
| 319-448, gnl|mm7|chr5 (121638490-121638336) | |
| 319-448, gnl|Mm7|chr5 (121638343-121638472) | |
| 319-448, gnl|monDom2|scaffold_97 (922926-922770) | |
| 319-448, gnl|oryCun1|scaffold_106916 (1425-1599) | |
| 319-448, gnl|panTro1|chr10 (111916082-111916249) | |
| 319-448, gnl|rheMac2|chr11 (111366410-111366577) | |
| 319-448, gnl|rn3|chr12 (35232429-35232583) | |
| 319-448, gnl|tetNig1|chrUn_random (90794573-90794709) | |
| 319-448, gnl|xenTro1|scaffold_501 (515584-515436) |