Non-Coding RNA Search

Ova2-C0003260_I03

Sequence:


               
               GGCATGGCGCAGCCGTAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGAGCCAGCAGT
GTCCCAAGCTGTGTTGGACAACCCTCACCATGGCTTCTGGCGGTCTGGCATCATGGAGGA
GCAGCTGCTGGATGCTGTGGTCCCCTTCCTCCCCCTCCAGCGGCATCATGTGCGCCACTG
TGTGCTCAATGAGCTGGCTCAGCTGGGTTTGGAGCCCCGAGAGGAGGTGGTTCAGGCTGT
GCTGGACAGTACCACCTACTTCCCTGAGGAGGAGCAGCTCTTCTCCTCCAATGGCTGCAA
GACAGTGGCATCCCGAATCACATTTTTCCTCTGAGAACCCCGGGGGCATCATTGCCTCCT
CTGCCTAGACAGATCAAACAGACGCCTGGGCGTCTCCTGGAAGAATTCTTCCCTAAGCTG
GCTGGCAAGTGGGACCCAGAGCACAGAGTTACGATGAAGAAAGGAGTTGGCAGGCCAAGG
AAGAAAGGTCTAGAAGCATCTTTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCATGGCGCAGCCGTAGGGACAGGGAAGAAATCAGCCTACAGGAGGTGGAGCCAGCAGT
GTCCCAAGCTGTGTTGGACAACCCTCACCATGGCTTCTGGCGGTCTGGCATCATGGAGGA
GCAGCTGCTGGATGCTGTGGTCCCCTTCCTCCCCCTCCAGCGGCATCATGTGCGCCACTG
TGTGCTCAATGAGCTGGCTCAGCTGGGTTTGGAGCCCCGAGAGGAGGTGGTTCAGGCTGT
GCTGGACAGTACCACCTACTTCCCTGAGGAGGAGCAGCTCTTCTCCTCCAATGGCTGCAA
GACAGTGGCATCCCGAATCACATTTTTCCTCTGAGAACCCCGGGGGCATCATTGCCTCCT
CTGCCTAGACAGATCAAACAGACGCCTGGGCGTCTCCTGGAAGAATTCTTCCCTAAGCTG
GCTGGCAAGTGGGACCCAGAGCACAGAGTTACGATGAAGAAAGGAGTTGGCAGGCCAAGG
AAGAAAGGTCTAGAAGCATCTTTGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51593428|gb|AAH80527.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51593428|gb|AAH80527.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               160-433, - strand, RNAz p=0.811304

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-433, - strand, RNAz p=0.811304

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               81-474, gnl|bosTau2|chr11 (79576689-79576298)
               

               
               81-474, gnl|Hg17|chr9 (127574120-127573755)
               

               
               81-474, gnl|Mm7|chr2 (32768798-32769195)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-474, gnl|bosTau2|chr11 (79576689-79576298)
               

               
               81-474, gnl|Hg17|chr9 (127574120-127573755)
               

               
               81-474, gnl|Mm7|chr2 (32768798-32769195)

	81-474, gnl\|bosTau2\|chr11 (79576689-79576298)
	81-474, gnl\|Hg17\|chr9 (127574120-127573755)
	81-474, gnl\|Mm7\|chr2 (32768798-32769195)