Ova2-C0003260_P09
|
TTTGCCCTCACAAAGATGGTGTTTGTGGTACAGGTTCCCTATCAGTTTGGATTCCGGTTG
TAGTTTTATTTATTTATTTATTTATTTATTTTTTAACGATACGTGGTCGCGGACGGAGAA
ATGGATGCCAGAGACAAGCAAGTTCTCCGCTCACTGCGTCTGGAGCTGGGTGCTGAGGTT
CTGGTAGAAGGACTGGTTCTTCAGTACCTTTACCAGGAAGGAATTTTGACGGAAAACCAC
ATTCAAGAAATCAAAGCTCAAACCACAGGCCTCCGGAAGACAATGCTTTTGCTGGACATT
CTGCCTTCCAGGGGCCCCAAAGCCTTTGACACCTTCCTAGATTCCCTCCAGGAATTTCCC
TGGGTAAGAGAGAAGCTGGAGAAGGCAAGAGAGGAAGCCACGGCTGAGCTGCCTACAGGT
GACTGGATGTCTGGAATCCCCTCCCACATCCTCAACAGCTCCCCATCAGACCGGCAGATT
AACCAGCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTGCCCTCACAAAGATGGTGTTTGTGGTACAGGTTCCCTATCAGTTTGGATTCCGGTTG
TAGTTTTATTTATTTATTTATTTATTTATTTTTTAACGATACGTGGTCGCGGACGGAGAA
ATGGATGCCAGAGACAAGCAAGTTCTCCGCTCACTGCGTCTGGAGCTGGGTGCTGAGGTT
CTGGTAGAAGGACTGGTTCTTCAGTACCTTTACCAGGAAGGAATTTTGACGGAAAACCAC
ATTCAAGAAATCAAAGCTCAAACCACAGGCCTCCGGAAGACAATGCTTTTGCTGGACATT
CTGCCTTCCAGGGGCCCCAAAGCCTTTGACACCTTCCTAGATTCCCTCCAGGAATTTCCC
TGGGTAAGAGAGAAGCTGGAGAAGGCAAGAGAGGAAGCCACGGCTGAGCTGCCTACAGGT
GACTGGATGTCTGGAATCCCCTCCCACATCCTCAACAGCTCCCCATCAGACCGGCAGATT
AACCAGCTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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115-420, gnl|bosTau2|chr5 (14564338-14564643) |
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115-420, gnl|canFam2|chr15 (36890266-36890506) |
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115-420, gnl|danRer3|chr4 (19671823-19671594) |
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115-420, gnl|dasNov1|scaffold_4907 (52380-52140) |
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115-420, gnl|fr1|chrUn (296500855-296500615) |
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115-420, gnl|galGal2|chr1 (41714167-41714409) |
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115-420, gnl|hg17|chr12 (92575009-92575249) |
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115-420, gnl|Hg17|chr12 (92575013-92575318) |
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115-420, gnl|loxAfr1|scaffold_1358 (11251-11490) |
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115-420, gnl|mm7|chr10 (94883494-94883254) |
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115-420, gnl|Mm7|chr10 (94883488-94883183) |
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115-420, gnl|monDom2|scaffold_34 (22648352-22648113) |
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115-420, gnl|oryCun1|scaffold_199791 (560-800) |
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115-420, gnl|panTro1|chr10 (94745521-94745761) |
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115-420, gnl|rheMac2|chr11 (94889588-94889828) |
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115-420, gnl|rn3|chr7 (32536648-32536408) |
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115-420, gnl|xenTro1|scaffold_247 (458263-458497) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
115-420, gnl|bosTau2|chr5 (14564338-14564643) |
|
115-420, gnl|canFam2|chr15 (36890266-36890506) |
|
115-420, gnl|danRer3|chr4 (19671823-19671594) |
|
115-420, gnl|dasNov1|scaffold_4907 (52380-52140) |
|
115-420, gnl|fr1|chrUn (296500855-296500615) |
|
115-420, gnl|galGal2|chr1 (41714167-41714409) |
|
115-420, gnl|hg17|chr12 (92575009-92575249) |
|
115-420, gnl|Hg17|chr12 (92575013-92575318) |
|
115-420, gnl|loxAfr1|scaffold_1358 (11251-11490) |
|
115-420, gnl|mm7|chr10 (94883494-94883254) |
|
115-420, gnl|Mm7|chr10 (94883488-94883183) |
|
115-420, gnl|monDom2|scaffold_34 (22648352-22648113) |
|
115-420, gnl|oryCun1|scaffold_199791 (560-800) |
|
115-420, gnl|panTro1|chr10 (94745521-94745761) |
|
115-420, gnl|rheMac2|chr11 (94889588-94889828) |
|
115-420, gnl|rn3|chr7 (32536648-32536408) |
|
115-420, gnl|xenTro1|scaffold_247 (458263-458497) |
