Non-Coding RNA Search

Ova2-C0003263_B15

Sequence:


               
               GGCAGATGCTCTCAAGAGCATCAACAACGCGGAGAAGAGGGGCAAACGCCAGGTCCTCAT
CAGGCCGTGTTCCAAAGTCATCGTTCGGTTCCTAACTGTGATGATGAAGCATGGCTACAT
TGGTGAATTCGAGATCATTGATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGG
AAGGTTGAACAAGTGTGGAGTTATAAGCCCTAGATTTGATGTTCAACTCAAAGACCTATA
GAAGTGGCAGAACAATCTGCTCCCATCACGGCAGTTTGGTTTCATTGTGCTGACGACCTC
GGCTGGCATCATGGACCATGAAGAGGCAAGACGAATACATACAGGAGGGAAAATCCTGGG
ATTCTTTTTTTAAATGTAAAGCATACATAAATAATGAGACCGTGTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAGATGCTCTCAAGAGCATCAACAACGCGGAGAAGAGGGGCAAACGCCAGGTCCTCAT
CAGGCCGTGTTCCAAAGTCATCGTTCGGTTCCTAACTGTGATGATGAAGCATGGCTACAT
TGGTGAATTCGAGATCATTGATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGG
AAGGTTGAACAAGTGTGGAGTTATAAGCCCTAGATTTGATGTTCAACTCAAAGACCTATA
GAAGTGGCAGAACAATCTGCTCCCATCACGGCAGTTTGGTTTCATTGTGCTGACGACCTC
GGCTGGCATCATGGACCATGAAGAGGCAAGACGAATACATACAGGAGGGAAAATCCTGGG
ATTCTTTTTTTAAATGTAAAGCATACATAAATAATGAGACCGTGTAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15294043|gb|AAK95198.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15294043|gb|AAK95198.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-155, + strand, RNAz p=0.993761

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-155, + strand, RNAz p=0.993761

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-396, gnl|bosTau2|chr10 (59314676-59315073)
               

               
               1-396, gnl|Hg17|chr8 (30094817-30094408)
               

               
               1-396, gnl|Mm7|chr11 (6125019-6124626)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-396, gnl|bosTau2|chr10 (59314676-59315073)
               

               
               1-396, gnl|Hg17|chr8 (30094817-30094408)
               

               
               1-396, gnl|Mm7|chr11 (6125019-6124626)

	1-396, gnl\|bosTau2\|chr10 (59314676-59315073)
	1-396, gnl\|Hg17\|chr8 (30094817-30094408)
	1-396, gnl\|Mm7\|chr11 (6125019-6124626)