Non-Coding RNA Search

Ova2-C0003263_F24

Sequence:


               
               CACCTCACCCACTGGGCAGTTGGCACCATAGAGGATCACCTCCGTCCTTACATGCCAGAG
TAAATAAGAGCATTGACCAGCAATGGAGAAGACCAGAGAATGCAGCAGCTATTTTCTTTT
CTTGTTTTCTTACCACTTTTCTTTCAGAGTTTAAAGAAAATGGACTCATGCACAGAACAC
TATGCGTTTTGAAACTTGTTCATCCTGGATTTATTTTAATCATTTGTATCACAGAACTTT
AAAAAAAATCAGATGTCTTCTGCACGGACTGTGTGAAAGTGCTTTGCAGACTGCTGCACT
GCATCAGCGTCTTACTAAAGTGTGAAGGAAGGACTACTGTACACTGAATGCTTACTGTAT
CTGAAAGCACAGGGATGCTCAGTGTTGTGGTCTTCATGTTTGTGCTGGGTTTTGCCTCTG
ACATCTGTCATCAGTATTGAGGGTGAGAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCTCACCCACTGGGCAGTTGGCACCATAGAGGATCACCTCCGTCCTTACATGCCAGAG
TAAATAAGAGCATTGACCAGCAATGGAGAAGACCAGAGAATGCAGCAGCTATTTTCTTTT
CTTGTTTTCTTACCACTTTTCTTTCAGAGTTTAAAGAAAATGGACTCATGCACAGAACAC
TATGCGTTTTGAAACTTGTTCATCCTGGATTTATTTTAATCATTTGTATCACAGAACTTT
AAAAAAAATCAGATGTCTTCTGCACGGACTGTGTGAAAGTGCTTTGCAGACTGCTGCACT
GCATCAGCGTCTTACTAAAGTGTGAAGGAAGGACTACTGTACACTGAATGCTTACTGTAT
CTGAAAGCACAGGGATGCTCAGTGTTGTGGTCTTCATGTTTGTGCTGGGTTTTGCCTCTG
ACATCTGTCATCAGTATTGAGGGTGAGAGTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               116-229, - strand, RNAz p=0.853489

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               116-229, - strand, RNAz p=0.853489

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-448, gnl|bosTau2|chr23 (26566810-26566347)
               

               
               1-448, gnl|Hg17|chr6 (24814406-24813947)
               

               
               1-448, gnl|Mm7|chr13 (24178502-24178956)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-448, gnl|bosTau2|chr23 (26566810-26566347)
               

               
               1-448, gnl|Hg17|chr6 (24814406-24813947)
               

               
               1-448, gnl|Mm7|chr13 (24178502-24178956)

	1-448, gnl\|bosTau2\|chr23 (26566810-26566347)
	1-448, gnl\|Hg17\|chr6 (24814406-24813947)
	1-448, gnl\|Mm7\|chr13 (24178502-24178956)