Non-Coding RNA Search

Ova2-C0003264_F23

Sequence:


               
               CCCGTTCCAGCATCCGTTTTGCAGCCTTTCAGCAACCCCAGTGCTGTGTATCTTCCTTCA
GCTCCCATCAGCTCGAGACTCACCTCTTCTTACATAATGACATCAGCCATGCTCTCAGAC
GCAGCTTTTGTGGCATCGCCGGACCCACGCGTCCTCATGTCCCACACCACAGCTTTCCCC
CATGTGGCTGCAACCCTGAGCATCATGGACTCAACCTTCAAGGCCCCATCCGCCGTGTCC
CCGATACCAGCTGTCATTCCTTCCCCATCCCACAAGCCATCCAAAACCAAAACCAGCAAA
TCCTCAAAAGTGAAAGACCTGTCCGCTCGTAGCGACGAATCTCCAAGTAACAAAAAGAGG
AAGCCGCAGTCCTCTATTTCCTCCTCCTCCTTATCCTTGCAGGCTTCCCTCTCGTCTCCA
TTGTCAGGTCCTCACAAAAAGAACTGCGTTCTGAATGCCAGTTCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGTTCCAGCATCCGTTTTGCAGCCTTTCAGCAACCCCAGTGCTGTGTATCTTCCTTCA
GCTCCCATCAGCTCGAGACTCACCTCTTCTTACATAATGACATCAGCCATGCTCTCAGAC
GCAGCTTTTGTGGCATCGCCGGACCCACGCGTCCTCATGTCCCACACCACAGCTTTCCCC
CATGTGGCTGCAACCCTGAGCATCATGGACTCAACCTTCAAGGCCCCATCCGCCGTGTCC
CCGATACCAGCTGTCATTCCTTCCCCATCCCACAAGCCATCCAAAACCAAAACCAGCAAA
TCCTCAAAAGTGAAAGACCTGTCCGCTCGTAGCGACGAATCTCCAAGTAACAAAAAGAGG
AAGCCGCAGTCCTCTATTTCCTCCTCCTCCTTATCCTTGCAGGCTTCCCTCTCGTCTCCA
TTGTCAGGTCCTCACAAAAAGAACTGCGTTCTGAATGCCAGTTCTGCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               280-427, - strand, RNAz p=0.886444

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               280-427, - strand, RNAz p=0.886444

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-468, gnl|bosTau2|chr4 (22656010-22656483)
               

               
               1-468, gnl|Hg17|chr7 (104849156-104848677)
               

               
               1-468, gnl|Mm7|chr12 (31211186-31211653)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chr4 (22656010-22656483)
               

               
               1-468, gnl|Hg17|chr7 (104849156-104848677)
               

               
               1-468, gnl|Mm7|chr12 (31211186-31211653)

	1-468, gnl\|bosTau2\|chr4 (22656010-22656483)
	1-468, gnl\|Hg17\|chr7 (104849156-104848677)
	1-468, gnl\|Mm7\|chr12 (31211186-31211653)