Non-Coding RNA Search

Ova2-C0003264_O05

Sequence:


               
               GACACTGCAGCAAAGTCGAGGTTTTGGAAGCTTCAGATTCCCTTCAGGGAACCAGGGTGG
AGCTGGCCCAAGTCAGGGCAGTGGAGGTGGCACAGGTGGCAATGTGTACACAGAAGACAA
TGACGATGACCTCTATGGCTAACTGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGAC
CTTGTTCCCTGGGGGTGGGGGCGCTCGCCCAATGGGAACCAGGGGTGTGCCCATGGCCTG
TTCCATTCCTCAGTCCAAACAGTTCAGCCCCAGTCAGACTCTGGACAGGGGTTTTCTGTT
GCAAAAAAAAATTACAAAAGCGATAAAATAAAAGTGATTTTCATTTGGGAGGTGAAGAGT
GAATTACCAGCAAGGAGCTGGGGCTTGGGCCCTCACCATTTCTGTTGTAGTTTGGGTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACACTGCAGCAAAGTCGAGGTTTTGGAAGCTTCAGATTCCCTTCAGGGAACCAGGGTGG
AGCTGGCCCAAGTCAGGGCAGTGGAGGTGGCACAGGTGGCAATGTGTACACAGAAGACAA
TGACGATGACCTCTATGGCTAACTGATGTGCCAGCATGCAGCGAGCTGGCCTGGCTGGAC
CTTGTTCCCTGGGGGTGGGGGCGCTCGCCCAATGGGAACCAGGGGTGTGCCCATGGCCTG
TTCCATTCCTCAGTCCAAACAGTTCAGCCCCAGTCAGACTCTGGACAGGGGTTTTCTGTT
GCAAAAAAAAATTACAAAAGCGATAAAATAAAAGTGATTTTCATTTGGGAGGTGAAGAGT
GAATTACCAGCAAGGAGCTGGGGCTTGGGCCCTCACCATTTCTGTTGTAGTTTGGGTGGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               192-309, + strand, RNAz p=0.587964

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               192-309, + strand, RNAz p=0.587964

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_007126, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_007126, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               34-413, gnl|bosTau2|chr8 (27851232-27850844)
               

               
               34-413, gnl|Hg17|chr9 (35047222-35046839)
               

               
               34-413, gnl|Mm7|chr4 (42994451-42994069)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-413, gnl|bosTau2|chr8 (27851232-27850844)
               

               
               34-413, gnl|Hg17|chr9 (35047222-35046839)
               

               
               34-413, gnl|Mm7|chr4 (42994451-42994069)

	34-413, gnl\|bosTau2\|chr8 (27851232-27850844)
	34-413, gnl\|Hg17\|chr9 (35047222-35046839)
	34-413, gnl\|Mm7\|chr4 (42994451-42994069)