Non-Coding RNA Search

Ova2-C0003265_G14

Sequence:


               
               GATAAGTACAGGGGTTGCGTGTGCATCGTCACCAACGTGGCCTCGCAATGAGGCAAAACC
GACGTAAACTACACTCAGCTAGTCGATCTGCATGCCCGATACGCCGAGTGTGGTTTACGA
ATCCTGGCCTTCCCTTGCAACCAGTTCGGGAGGCAGGAGCCAGGAAGTAATCAAGAAATC
AAGGAGTTTGCAGCCGGCTACAATGTCAGGTTTGACATGTACAGCAAGATCTGTGTAAAT
GGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATG
CTGGGAAATGCCATCAAATGGAACTTTACCAAGTTTCTCATTGATAAGAACGGCTGCGTG
GTGAAGCGCTATGGTCCCATGGAGGAGCCCCAGGTGATAGAGAAGGACCTGCCGTGCTAT
CTCTAGCCCTACAGTGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAAGTACAGGGGTTGCGTGTGCATCGTCACCAACGTGGCCTCGCAATGAGGCAAAACC
GACGTAAACTACACTCAGCTAGTCGATCTGCATGCCCGATACGCCGAGTGTGGTTTACGA
ATCCTGGCCTTCCCTTGCAACCAGTTCGGGAGGCAGGAGCCAGGAAGTAATCAAGAAATC
AAGGAGTTTGCAGCCGGCTACAATGTCAGGTTTGACATGTACAGCAAGATCTGTGTAAAT
GGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATG
CTGGGAAATGCCATCAAATGGAACTTTACCAAGTTTCTCATTGATAAGAACGGCTGCGTG
GTGAAGCGCTATGGTCCCATGGAGGAGCCCCAGGTGATAGAGAAGGACCTGCCGTGCTAT
CTCTAGCCCTACAGTGTGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13195731|gb|AAB21327.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13195731|gb|AAB21327.2|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               33-143, + strand, RNAz p=0.998826

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               33-143, + strand, RNAz p=0.998826

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-437, gnl|bosTau2|chr12 (21702774-21703207)
               

               
               1-437, gnl|Hg17|chr19 (1056365-1057583)
               

               
               1-437, gnl|Mm7|chr10 (45687235-45687676)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-437, gnl|bosTau2|chr12 (21702774-21703207)
               

               
               1-437, gnl|Hg17|chr19 (1056365-1057583)
               

               
               1-437, gnl|Mm7|chr10 (45687235-45687676)

	1-437, gnl\|bosTau2\|chr12 (21702774-21703207)
	1-437, gnl\|Hg17\|chr19 (1056365-1057583)
	1-437, gnl\|Mm7\|chr10 (45687235-45687676)