Non-Coding RNA Search

Ova2-C0003265_J02

Sequence:


               
               GCGGCTCGAGATTGGTGCTTCCTTCCGTGGGGGCCGAGGGCTTGGGATCCTGACCACGAT
GACAGTCCTGCTGCATGAAGTGCCTCATGAGGTTGGGGACTTTGCCATCTTGGTCCAGTC
TGGCTGCAGCAAGAAACAGGCGATGCGTCTGCAACTCTTGACTGCAATTGGAGCATTGGC
AGGCACAGCCTGTGCCCTTCTCACTGAGGGAGGGGCAGTGGGCAGTGAGGTGGCTGGTGG
TGCAGGTCCCGGCTGGGTTCTGCCATTCACTGCAGGTGGATTCATCTATGTGGCAACAGT
GTCCGTGCTACCTGAGCTACTGAGAGAGGCATCCCCGTTACAGTCCCTCTTGGAGGTGCT
GGGGCTGCTGGGGGGCGTTGCCATGATGGTACTGATTGCCCATCTTGAGTGAGGGGTGGG
TGACCTGTCCCTACCCTACTCCAAAATAAGGCAGTTGGGACCCCTGGCAGTGCATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGATTGGTGCTTCCTTCCGTGGGGGCCGAGGGCTTGGGATCCTGACCACGAT
GACAGTCCTGCTGCATGAAGTGCCTCATGAGGTTGGGGACTTTGCCATCTTGGTCCAGTC
TGGCTGCAGCAAGAAACAGGCGATGCGTCTGCAACTCTTGACTGCAATTGGAGCATTGGC
AGGCACAGCCTGTGCCCTTCTCACTGAGGGAGGGGCAGTGGGCAGTGAGGTGGCTGGTGG
TGCAGGTCCCGGCTGGGTTCTGCCATTCACTGCAGGTGGATTCATCTATGTGGCAACAGT
GTCCGTGCTACCTGAGCTACTGAGAGAGGCATCCCCGTTACAGTCCCTCTTGGAGGTGCT
GGGGCTGCTGGGGGGCGTTGCCATGATGGTACTGATTGCCCATCTTGAGTGAGGGGTGGG
TGACCTGTCCCTACCCTACTCCAAAATAAGGCAGTTGGGACCCCTGGCAGTGCATTGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8WMN3_MACMU

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8WMN3_MACMU

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               137-295, + strand, RNAz p=0.7838

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               137-295, + strand, RNAz p=0.7838

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               170-243, + strand, RNAmicro p=0.97179

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               170-243, + strand, RNAmicro p=0.97179

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               137-420, gnl|bosTau2|chr23 (5555245-5554962)
               

               
               137-420, gnl|Hg17|chr6 (33279293-33279575)
               

               
               137-420, gnl|Mm7|chr17 (32107508-32107225)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               137-420, gnl|bosTau2|chr23 (5555245-5554962)
               

               
               137-420, gnl|Hg17|chr6 (33279293-33279575)
               

               
               137-420, gnl|Mm7|chr17 (32107508-32107225)

	137-420, gnl\|bosTau2\|chr23 (5555245-5554962)
	137-420, gnl\|Hg17\|chr6 (33279293-33279575)
	137-420, gnl\|Mm7\|chr17 (32107508-32107225)