Non-Coding RNA Search

Ova2-C0003271_B01

Sequence:


               
               AAAGCGGTGAAAAACTGCCTGGCTCTAGCTGATGACAGAAAGCTGAAGTCCATCGCCTTC
CCGAGTATCGGCAGTGGCAGGAACGGGTTCCCGAAGCAGACAGCCGCCCAACTCATTCTG
AAGGCCATCTCCAGCTACTTTGTGTCCACTATGTCGTCCTCCATCAAAACTGTGTACTTT
GTGCTTTTTGACAGTGAGAGCATGGGCATCTACGTGCAGGAAATGGCCAAACTGGATGCC
AACTAGGCCAGCGTTCCCAGAGAGCCAGCACATGTCGTGGCCCCCACCTCCAACTGGAAA
GAAAGAAAAAAAAAGAAAAAAATCCCCTCGGCTCTTATGGGGAGGTGGGGGCTCCTTTCC
TTTTCAGTTCTGCTCATCTAGGGGAAATAAGGTTTTGGTTTCCGGTTTGATTGTTTTTGG
CCTTCTACAATGTTTTCTGTTAGCACTGATAGCTGGCATTGTCCTTGCTAAGCACTGCGT
TCCAGACCGTGTCTGACTTAGTTAACCTAGGAGATTTTATAGTTTTACTTTAATGAAGTC
CTGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGCGGTGAAAAACTGCCTGGCTCTAGCTGATGACAGAAAGCTGAAGTCCATCGCCTTC
CCGAGTATCGGCAGTGGCAGGAACGGGTTCCCGAAGCAGACAGCCGCCCAACTCATTCTG
AAGGCCATCTCCAGCTACTTTGTGTCCACTATGTCGTCCTCCATCAAAACTGTGTACTTT
GTGCTTTTTGACAGTGAGAGCATGGGCATCTACGTGCAGGAAATGGCCAAACTGGATGCC
AACTAGGCCAGCGTTCCCAGAGAGCCAGCACATGTCGTGGCCCCCACCTCCAACTGGAAA
GAAAGAAAAAAAAAGAAAAAAATCCCCTCGGCTCTTATGGGGAGGTGGGGGCTCCTTTCC
TTTTCAGTTCTGCTCATCTAGGGGAAATAAGGTTTTGGTTTCCGGTTTGATTGTTTTTGG
CCTTCTACAATGTTTTCTGTTAGCACTGATAGCTGGCATTGTCCTTGCTAAGCACTGCGT
TCCAGACCGTGTCTGACTTAGTTAACCTAGGAGATTTTATAGTTTTACTTTAATGAAGTC
CTGATA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9CTH9_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9CTH9_MOUSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               117-236, - strand, RNAz p=0.760242

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               117-236, - strand, RNAz p=0.760242

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               78-246, gnl|bosTau2|chr28 (19459782-19459614)
               

               
               78-246, gnl|Hg17|chr10 (71541277-71541445)
               

               
               78-246, gnl|Mm7|chr10 (61257923-61257755)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-246, gnl|bosTau2|chr28 (19459782-19459614)
               

               
               78-246, gnl|Hg17|chr10 (71541277-71541445)
               

               
               78-246, gnl|Mm7|chr10 (61257923-61257755)

	78-246, gnl\|bosTau2\|chr28 (19459782-19459614)
	78-246, gnl\|Hg17\|chr10 (71541277-71541445)
	78-246, gnl\|Mm7\|chr10 (61257923-61257755)