Non-Coding RNA Search

Ova2-C0003271_I14

Sequence:


               
               GTTTGGAGCCTGTGGCGCCTTTCTCGCACTTTATTGACAAATTGACCTCAACCCCTTTGT
CCCATGTCTCAACTCACAGATATATGTCATAGGTTATATATTTGTGTTTCTGATCCCTCG
TTATTTTATCCATCATGGTCCCAAATTTTTGTAATGTTACTGGGGTTTGGGGTGGGGTGG
GGTGTTAAAGTGCTCTGGGCTGGAAAAAGACAAGCCCAAACCTATTGATTGTCGAATTCT
TAGATGACAGAAGTGGAGAGAGGGGCTTGTGGTCCCTTGTGATGGGAAGTGCTGTGAACA
TGTAGAAGGCCCTGCCAGGCCTCGCTCTCTCAAGTCTGTATGTATTTTTCGGGAGACCAA
ACCAGACACCAGATAATCAGGAAGAAAGCTTTTTAAAATAAGGCAAAAACCGAGACCTTG
TCTAGATATTTTTAGTTTGTTGCCAAGGTAGCACTGAGAAATCTCACTTGAATGTTACAT
AAGGAGTGATTCACAATAGTCTAGAGTGAAGAAAGTTATCTGGGTCTGTGAGTGTTCGGG
TCCGTTTGCTGCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGGAGCCTGTGGCGCCTTTCTCGCACTTTATTGACAAATTGACCTCAACCCCTTTGT
CCCATGTCTCAACTCACAGATATATGTCATAGGTTATATATTTGTGTTTCTGATCCCTCG
TTATTTTATCCATCATGGTCCCAAATTTTTGTAATGTTACTGGGGTTTGGGGTGGGGTGG
GGTGTTAAAGTGCTCTGGGCTGGAAAAAGACAAGCCCAAACCTATTGATTGTCGAATTCT
TAGATGACAGAAGTGGAGAGAGGGGCTTGTGGTCCCTTGTGATGGGAAGTGCTGTGAACA
TGTAGAAGGCCCTGCCAGGCCTCGCTCTCTCAAGTCTGTATGTATTTTTCGGGAGACCAA
ACCAGACACCAGATAATCAGGAAGAAAGCTTTTTAAAATAAGGCAAAAACCGAGACCTTG
TCTAGATATTTTTAGTTTGTTGCCAAGGTAGCACTGAGAAATCTCACTTGAATGTTACAT
AAGGAGTGATTCACAATAGTCTAGAGTGAAGAAAGTTATCTGGGTCTGTGAGTGTTCGGG
TCCGTTTGCTGCTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               417-529, - strand, RNAz p=0.817953

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               417-529, - strand, RNAz p=0.817953

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               212-556, gnl|bosTau2|chr5 (51216594-51216946)
               

               
               212-556, gnl|Hg17|chr12 (26165274-26164890)
               

               
               212-556, gnl|Mm7|chr6 (145952452-145952125)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               212-556, gnl|bosTau2|chr5 (51216594-51216946)
               

               
               212-556, gnl|Hg17|chr12 (26165274-26164890)
               

               
               212-556, gnl|Mm7|chr6 (145952452-145952125)

	212-556, gnl\|bosTau2\|chr5 (51216594-51216946)
	212-556, gnl\|Hg17\|chr12 (26165274-26164890)
	212-556, gnl\|Mm7\|chr6 (145952452-145952125)