Ova2-C0003271_J16
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCGTGGTGATCTTCTCCGGACAGGGGTCAGATGAGCTTACACAGGGCTATATATATTTC CACAAGGCGCCTTCTCCTGAGAAGGCGGATGATGAGAGAGAGAGGCTCCTGAAGGAACTC TACCTGTTTGATGTCCTCCGTGCCGACCGCACTACTGCTGCTCACGGTCTCTAACTGAGA GTCCCGTTTCTGGATCATCGGGTTTCTTCCTATTACCTGTCTCTGCCACCAGAGATGAGA ATTCCAAAAGATGGCATAGAAAAACATCTCCTGAGAGAGACTTTTGAGGACTCCAACCTG CTACCCAAAGAGATTCTCTGGCGACCCAAGGAAGCCTTCAGTGATGGGATCACCTCACTC AAGAACTCCTGGTTCAAGATTTTACAGGACTTCGTTGAACATCAGGTTGATGATGCGATG ATGTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCGTGGTGATCTTCTCCGGACAGGGGTCAGATGAGCTTACACAGGGCTATATATATTTC CACAAGGCGCCTTCTCCTGAGAAGGCGGATGATGAGAGAGAGAGGCTCCTGAAGGAACTC TACCTGTTTGATGTCCTCCGTGCCGACCGCACTACTGCTGCTCACGGTCTCTAACTGAGA GTCCCGTTTCTGGATCATCGGGTTTCTTCCTATTACCTGTCTCTGCCACCAGAGATGAGA ATTCCAAAAGATGGCATAGAAAAACATCTCCTGAGAGAGACTTTTGAGGACTCCAACCTG CTACCCAAAGAGATTCTCTGGCGACCCAAGGAAGCCTTCAGTGATGGGATCACCTCACTC AAGAACTCCTGGTTCAAGATTTTACAGGACTTCGTTGAACATCAGGTTGATGATGCGATG ATGTCTG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 251-369, + strand, RNAz p=0.579474 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 251-369, + strand, RNAz p=0.579474 |
| Aligned organism(s): 51 entry(ies) | More info |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
| 251-407, gnl|bosTau2|chr4 (4124335-4124491) | |
| 251-407, gnl|canFam2|chr14 (25667596-25667778) | |
| 251-407, gnl|canFam2|chr14 (25667789-25667594) | |
| 251-407, gnl|canFam2|chr14 (25667596-25667752) | |
| 251-407, gnl|danRer3|chr19 (29905936-29906109) | |
| 251-407, gnl|danRer3|chr19 (29906109-29905934) | |
| 251-407, gnl|danRer3|chr19 (29905936-29906092) | |
| 251-407, gnl|dasNov1|scaffold_6885 (5490-5673) | |
| 251-407, gnl|dasNov1|scaffold_6885 (5684-5488) | |
| 251-407, gnl|dasNov1|scaffold_6885 (5490-5646) | |
| 251-407, gnl|echTel1|scaffold_26451 (934-1127) | |
| 251-407, gnl|echTel1|scaffold_319716 (7168-7325) | |
| 251-407, gnl|echTel1|scaffold_319716 (7168-7324) | |
| 251-407, gnl|fr1|chrUn (39775615-39775435) | |
| 251-407, gnl|fr1|chrUn (39775428-39775617) | |
| 251-407, gnl|fr1|chrUn (39775615-39775459) | |
| 251-407, gnl|galGal2|chr2 (23961565-23961748) | |
| 251-407, gnl|galGal2|chr2 (23961757-23961563) | |
| 251-407, gnl|galGal2|chr2 (23961565-23961721) | |
| 251-407, gnl|hg17|chr7 (97127023-97127179) | |
| 251-407, gnl|Hg17|chr7 (97127177-97127021) | |
| 251-407, gnl|hg17|chr8 (47610869-47611050) | |
| 251-407, gnl|hg17|chr8 (47728549-47728744) | |
| 251-407, gnl|loxAfr1|scaffold_1886 (10599-10416) | |
| 251-407, gnl|loxAfr1|scaffold_1886 (10405-10601) | |
| 251-407, gnl|loxAfr1|scaffold_1886 (10599-10443) | |
| 251-407, gnl|mm7|chr6 (7628879-7629062) | |
| 251-407, gnl|mm7|chr6 (7629072-7628877) | |
| 251-407, gnl|mm7|chr6 (7628879-7629035) | |
| 251-407, gnl|Mm7|chr6 (7629033-7628877) | |
| 251-407, gnl|monDom2|scaffold_270 (2132-1965) | |
| 251-407, gnl|monDom2|scaffold_270 (1951-2134) | |
| 251-407, gnl|monDom2|scaffold_270 (2132-1976) | |
| 251-407, gnl|oryCun1|scaffold_203523 (139672-139812) | |
| 251-407, gnl|oryCun1|scaffold_203523 (139812-139674) | |
| 251-407, gnl|oryCun1|scaffold_203523 (139674-139809) | |
| 251-407, gnl|panTro1|chr6 (98776399-98776555) | |
| 251-407, gnl|panTro1|chr7 (49211270-49211466) | |
| 251-407, gnl|panTro1|chr7 (49328563-49328758) | |
| 251-407, gnl|rheMac2|chr3 (119430123-119429934) | |
| 251-407, gnl|rheMac2|chr3 (119429922-119430125) | |
| 251-407, gnl|rheMac2|chr3 (119430123-119429967) | |
| 251-407, gnl|rn3|chr4 (32878172-32878355) | |
| 251-407, gnl|rn3|chr4 (32878365-32878170) | |
| 251-407, gnl|rn3|chr4 (32878172-32878328) | |
| 251-407, gnl|tetNig1|chrUn_random (10383184-10383031) | |
| 251-407, gnl|tetNig1|chrUn_random (10383016-10383184) | |
| 251-407, gnl|tetNig1|chrUn_random (10383184-10383036) | |
| 251-407, gnl|xenTro1|scaffold_420 (349907-349726) | |
| 251-407, gnl|xenTro1|scaffold_420 (349720-349909) | |
| 251-407, gnl|xenTro1|scaffold_420 (349907-349751) |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 251-407, gnl|bosTau2|chr4 (4124335-4124491) | |
| 251-407, gnl|canFam2|chr14 (25667596-25667778) | |
| 251-407, gnl|canFam2|chr14 (25667789-25667594) | |
| 251-407, gnl|canFam2|chr14 (25667596-25667752) | |
| 251-407, gnl|danRer3|chr19 (29905936-29906109) | |
| 251-407, gnl|danRer3|chr19 (29906109-29905934) | |
| 251-407, gnl|danRer3|chr19 (29905936-29906092) | |
| 251-407, gnl|dasNov1|scaffold_6885 (5490-5673) | |
| 251-407, gnl|dasNov1|scaffold_6885 (5684-5488) | |
| 251-407, gnl|dasNov1|scaffold_6885 (5490-5646) | |
| 251-407, gnl|echTel1|scaffold_26451 (934-1127) | |
| 251-407, gnl|echTel1|scaffold_319716 (7168-7325) | |
| 251-407, gnl|echTel1|scaffold_319716 (7168-7324) | |
| 251-407, gnl|fr1|chrUn (39775615-39775435) | |
| 251-407, gnl|fr1|chrUn (39775428-39775617) | |
| 251-407, gnl|fr1|chrUn (39775615-39775459) | |
| 251-407, gnl|galGal2|chr2 (23961565-23961748) | |
| 251-407, gnl|galGal2|chr2 (23961757-23961563) | |
| 251-407, gnl|galGal2|chr2 (23961565-23961721) | |
| 251-407, gnl|hg17|chr7 (97127023-97127179) | |
| 251-407, gnl|Hg17|chr7 (97127177-97127021) | |
| 251-407, gnl|hg17|chr8 (47610869-47611050) | |
| 251-407, gnl|hg17|chr8 (47728549-47728744) | |
| 251-407, gnl|loxAfr1|scaffold_1886 (10599-10416) | |
| 251-407, gnl|loxAfr1|scaffold_1886 (10405-10601) | |
| 251-407, gnl|loxAfr1|scaffold_1886 (10599-10443) | |
| 251-407, gnl|mm7|chr6 (7628879-7629062) | |
| 251-407, gnl|mm7|chr6 (7629072-7628877) | |
| 251-407, gnl|mm7|chr6 (7628879-7629035) | |
| 251-407, gnl|Mm7|chr6 (7629033-7628877) | |
| 251-407, gnl|monDom2|scaffold_270 (2132-1965) | |
| 251-407, gnl|monDom2|scaffold_270 (1951-2134) | |
| 251-407, gnl|monDom2|scaffold_270 (2132-1976) | |
| 251-407, gnl|oryCun1|scaffold_203523 (139672-139812) | |
| 251-407, gnl|oryCun1|scaffold_203523 (139812-139674) | |
| 251-407, gnl|oryCun1|scaffold_203523 (139674-139809) | |
| 251-407, gnl|panTro1|chr6 (98776399-98776555) | |
| 251-407, gnl|panTro1|chr7 (49211270-49211466) | |
| 251-407, gnl|panTro1|chr7 (49328563-49328758) | |
| 251-407, gnl|rheMac2|chr3 (119430123-119429934) | |
| 251-407, gnl|rheMac2|chr3 (119429922-119430125) | |
| 251-407, gnl|rheMac2|chr3 (119430123-119429967) | |
| 251-407, gnl|rn3|chr4 (32878172-32878355) | |
| 251-407, gnl|rn3|chr4 (32878365-32878170) | |
| 251-407, gnl|rn3|chr4 (32878172-32878328) | |
| 251-407, gnl|tetNig1|chrUn_random (10383184-10383031) | |
| 251-407, gnl|tetNig1|chrUn_random (10383016-10383184) | |
| 251-407, gnl|tetNig1|chrUn_random (10383184-10383036) | |
| 251-407, gnl|xenTro1|scaffold_420 (349907-349726) | |
| 251-407, gnl|xenTro1|scaffold_420 (349720-349909) | |
| 251-407, gnl|xenTro1|scaffold_420 (349907-349751) |