Ova2-C0003272_D16
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGAAAAGAAGGAGGCAAGAAGAGGAACAAAGATGGAGGTGGAGATGGAGGTCGAGCAGA GTTGAATCCCTGGCCGGAGTACATTAACACACGCCTTGATATGTACCACAAGCTCAAAGC AGAGCATGATTCCATCCTGGCTGAAAAGGCAGCAAAAGACAGCAAGCCGATTAAAGTCAC CCTGCCCGACGGCAAGCAAGTGGATGCTGAGTCCTGGAAAACCACGCCGTATCAGATTGC ATGTGGCATTAGCCAGGGCCTGGCTGACAACACCGTTGTTGCTAAGGTGAACAAGGTTGT TTGGGACCTGGACCGCCCGCTGGAGACAGACTGCACTCTGGAGCTGCTCAAGTTTGAGGA CGAGGAAGCACAGGCAGTATATTGGCACTCTAGTGCCCACATAATGGGTGAGGCCATGGA AAGAGTCTACGGTGGATGCTTATGTTACGGCCCTCCAATAGAAAACGGCTTCTATTATGA TATGTACCTTGAAGAAAGGGGTGTGTCCAGCAATGATTTCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGAAAAGAAGGAGGCAAGAAGAGGAACAAAGATGGAGGTGGAGATGGAGGTCGAGCAGA GTTGAATCCCTGGCCGGAGTACATTAACACACGCCTTGATATGTACCACAAGCTCAAAGC AGAGCATGATTCCATCCTGGCTGAAAAGGCAGCAAAAGACAGCAAGCCGATTAAAGTCAC CCTGCCCGACGGCAAGCAAGTGGATGCTGAGTCCTGGAAAACCACGCCGTATCAGATTGC ATGTGGCATTAGCCAGGGCCTGGCTGACAACACCGTTGTTGCTAAGGTGAACAAGGTTGT TTGGGACCTGGACCGCCCGCTGGAGACAGACTGCACTCTGGAGCTGCTCAAGTTTGAGGA CGAGGAAGCACAGGCAGTATATTGGCACTCTAGTGCCCACATAATGGGTGAGGCCATGGA AAGAGTCTACGGTGGATGCTTATGTTACGGCCCTCCAATAGAAAACGGCTTCTATTATGA TATGTACCTTGAAGAAAGGGGTGTGTCCAGCAATGATTTCTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 377-499, + strand, RNAz p=0.662127 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 377-499, + strand, RNAz p=0.662127 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 60-252, gnl|bosTau2|chr19 (20059157-20059349) | |
| 60-252, gnl|Hg17|chr5 (33484402-33484594) | |
| 60-252, gnl|Mm7|chr15 (11452587-11452395) | |
| 377-499, gnl|bosTau2|chr19 (20064373-20064495) | |
| 377-499, gnl|canFam2|chr4 (77425044-77424883) | |
| 377-499, gnl|danRer3|chr5 (46066287-46066106) | |
| 377-499, gnl|dasNov1|scaffold_127663 (1155-1027) | |
| 377-499, gnl|echTel1|scaffold_309427 (158484-158655) | |
| 377-499, gnl|fr1|chrUn (175501796-175501964) | |
| 377-499, gnl|galGal2|chrZ_random (9344421-9344549) | |
| 377-499, gnl|hg17|chr5 (33490772-33490944) | |
| 377-499, gnl|Hg17|chr5 (33490807-33490929) | |
| 377-499, gnl|loxAfr1|scaffold_59268 (276-381) | |
| 377-499, gnl|mm7|chr15 (11451114-11450944) | |
| 377-499, gnl|Mm7|chr15 (11451079-11450957) | |
| 377-499, gnl|monDom2|scaffold_20 (39439236-39439069) | |
| 377-499, gnl|oryCun1|scaffold_172859 (48563-48392) | |
| 377-499, gnl|panTro1|chr4 (98830074-98830246) | |
| 377-499, gnl|rheMac2|chr7 (81844329-81844174) | |
| 377-499, gnl|rn3|chr2 (60706698-60706526) | |
| 377-499, gnl|tetNig1|chr12 (5558964-5558822) | |
| 377-499, gnl|xenTro1|scaffold_1136 (206686-206530) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-252, gnl|bosTau2|chr19 (20059157-20059349) | |
| 60-252, gnl|Hg17|chr5 (33484402-33484594) | |
| 60-252, gnl|Mm7|chr15 (11452587-11452395) | |
| 377-499, gnl|bosTau2|chr19 (20064373-20064495) | |
| 377-499, gnl|canFam2|chr4 (77425044-77424883) | |
| 377-499, gnl|danRer3|chr5 (46066287-46066106) | |
| 377-499, gnl|dasNov1|scaffold_127663 (1155-1027) | |
| 377-499, gnl|echTel1|scaffold_309427 (158484-158655) | |
| 377-499, gnl|fr1|chrUn (175501796-175501964) | |
| 377-499, gnl|galGal2|chrZ_random (9344421-9344549) | |
| 377-499, gnl|hg17|chr5 (33490772-33490944) | |
| 377-499, gnl|Hg17|chr5 (33490807-33490929) | |
| 377-499, gnl|loxAfr1|scaffold_59268 (276-381) | |
| 377-499, gnl|mm7|chr15 (11451114-11450944) | |
| 377-499, gnl|Mm7|chr15 (11451079-11450957) | |
| 377-499, gnl|monDom2|scaffold_20 (39439236-39439069) | |
| 377-499, gnl|oryCun1|scaffold_172859 (48563-48392) | |
| 377-499, gnl|panTro1|chr4 (98830074-98830246) | |
| 377-499, gnl|rheMac2|chr7 (81844329-81844174) | |
| 377-499, gnl|rn3|chr2 (60706698-60706526) | |
| 377-499, gnl|tetNig1|chr12 (5558964-5558822) | |
| 377-499, gnl|xenTro1|scaffold_1136 (206686-206530) |