Non-Coding RNA Search

Ova2-C0003272_F19

Sequence:


               
               TCATCAATAGACTGGTGGAAGCAGAGGTTCACCGTCTGGTGGTGGTGGATGAACATGACG
TGGTCAAGGGCATTGTATCGCTGTCTGACATCTTACAGGCTCTGGTGCTCACAGGTGGAG
AGAAGAAGCCCTGAGCATGGGGCGGAACAGGCAGTGCCTGGGGAGATGGCCCCCTCACTG
CCTGCCTGCTGTAAGAGCCGGAATCAGATGGAATCCTGAGAGAACGGAGTCTTCCCTCAG
GAGCTCCACGCCCACTGTCTAGAACTAGAGAAGGGGAAAGGAGGAGAAGGACTGTTAGCT
TCTCTCACCATCGTGCTACACTTGAGAAAACACTTGTCAGCCTAGCCAGCCCCAGTCGCT
CGTCACAGCCCCCTTGTGGGTGAACCATGAGTTTTGTGCTCCTCAGGCAGATCCTGATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATCAATAGACTGGTGGAAGCAGAGGTTCACCGTCTGGTGGTGGTGGATGAACATGACG
TGGTCAAGGGCATTGTATCGCTGTCTGACATCTTACAGGCTCTGGTGCTCACAGGTGGAG
AGAAGAAGCCCTGAGCATGGGGCGGAACAGGCAGTGCCTGGGGAGATGGCCCCCTCACTG
CCTGCCTGCTGTAAGAGCCGGAATCAGATGGAATCCTGAGAGAACGGAGTCTTCCCTCAG
GAGCTCCACGCCCACTGTCTAGAACTAGAGAAGGGGAAAGGAGGAGAAGGACTGTTAGCT
TCTCTCACCATCGTGCTACACTTGAGAAAACACTTGTCAGCCTAGCCAGCCCCAGTCGCT
CGTCACAGCCCCCTTGTGGGTGAACCATGAGTTTTGTGCTCCTCAGGCAGATCCTGATCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|33859997|sp||Q09138_8

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|33859997|sp||Q09138_8

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               106-253, - strand, RNAz p=0.837077

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               106-253, - strand, RNAz p=0.837077

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-404, gnl|bosTau2|chr25 (20097074-20097476)
               

               
               4-404, gnl|Hg17|chr12 (47683216-47682658)
               

               
               4-404, gnl|Mm7|chr15 (98798877-98798364)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-404, gnl|bosTau2|chr25 (20097074-20097476)
               

               
               4-404, gnl|Hg17|chr12 (47683216-47682658)
               

               
               4-404, gnl|Mm7|chr15 (98798877-98798364)

	4-404, gnl\|bosTau2\|chr25 (20097074-20097476)
	4-404, gnl\|Hg17\|chr12 (47683216-47682658)
	4-404, gnl\|Mm7\|chr15 (98798877-98798364)