Non-Coding RNA Search

Ova2-C0003272_K03

Sequence:


               
               GGACACAGCCTACAGCCTGCAGCTCACCGAGCCCACGGCCAATGAGCTGGGTGCCACCAA
TGTTTCCCCCAATGGCCTTTCCCTGCCCTTCTCTACCTGGGACCAAGACCACGACCTCCG
AGGGGACCTTAACTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGCACCTGCAGCCA
TTCCAATCTAAATGGACAATACTTCCACTCTATTCCACGGCAACGGCAGCAGCGTAAAAA
GGGGATCTTCTGGAAAACATGGAAGGGCCGCTACTATCCACTACAGGCTACCACCCTGTT
GATCCAGCCCATGGAGGCTACAGCAGCCTCCTAGCCTCCTCACTGGAGCCTGGTTCCAGG
CCTAAGAAGACAGTGACTTTGGTTGTGACCTTAAGATATGGCTGTTTTCTGCTGAGAGCA
GGAGCTCTAAGTAGGGCTATCTGGAGTCTCGTGGACAGAGAAGAAGCCCATAACTGGAGT
GACTGGAGGACCCCTTTCCGTGTTGGGGTCTGCAAGCACTGTTGTCTGAAACAGTCAGAG
CAACAGGAAACAAATGGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACACAGCCTACAGCCTGCAGCTCACCGAGCCCACGGCCAATGAGCTGGGTGCCACCAA
TGTTTCCCCCAATGGCCTTTCCCTGCCCTTCTCTACCTGGGACCAAGACCACGACCTCCG
AGGGGACCTTAACTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGCACCTGCAGCCA
TTCCAATCTAAATGGACAATACTTCCACTCTATTCCACGGCAACGGCAGCAGCGTAAAAA
GGGGATCTTCTGGAAAACATGGAAGGGCCGCTACTATCCACTACAGGCTACCACCCTGTT
GATCCAGCCCATGGAGGCTACAGCAGCCTCCTAGCCTCCTCACTGGAGCCTGGTTCCAGG
CCTAAGAAGACAGTGACTTTGGTTGTGACCTTAAGATATGGCTGTTTTCTGCTGAGAGCA
GGAGCTCTAAGTAGGGCTATCTGGAGTCTCGTGGACAGAGAAGAAGCCCATAACTGGAGT
GACTGGAGGACCCCTTTCCGTGTTGGGGTCTGCAAGCACTGTTGTCTGAAACAGTCAGAG
CAACAGGAAACAAATGGCCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               271-479, - strand, RNAz p=0.999893

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               271-479, - strand, RNAz p=0.999893

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               398-474, + strand, RNAmicro p=0.999898

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               398-474, + strand, RNAmicro p=0.999898

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               152-479, gnl|bosTau2|chr7 (11974824-11975135)
               

               
               152-479, gnl|Hg17|chr19 (8344588-8344915)
               

               
               152-479, gnl|Mm7|chr17 (31850408-31850082)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               152-479, gnl|bosTau2|chr7 (11974824-11975135)
               

               
               152-479, gnl|Hg17|chr19 (8344588-8344915)
               

               
               152-479, gnl|Mm7|chr17 (31850408-31850082)

	152-479, gnl\|bosTau2\|chr7 (11974824-11975135)
	152-479, gnl\|Hg17\|chr19 (8344588-8344915)
	152-479, gnl\|Mm7\|chr17 (31850408-31850082)