Non-Coding RNA Search

Ova2-C0003272_L11

Sequence:


               
               CTACTCGCTGCTGCTCACCTTCATCTATGGCGGGCGCGTGGTGCATGAGATCCAGGTGCA
CAGCCTAGACTGTCGGCTTGTGGCTGAGCCCTCAGACCCGGAGAGCAGCATGGTGCAGCA
GGTGGTGTTTCCCAGACCTGACCCACTGGAGCCCACCCAGAGCCTGCTGAATCAGCTCGA
GAGAGGCATCCTGGTGGCCAGCAATTCCAGAGGCCTCTTTGTTCAGCGCCTCTGCCCCAT
CCCCATCTCCTGGAACGCACCCGAGGCCCCACCTGGGCCTGGGCCTCATCTGCTGCCCAG
CAATAAGTGTGTGGAGCTCTTCAGTACCACATACTTCTGTAGAGATTTGGCCCAGTACTT
CCAGGGCCAGGGACCTCTACCCAAGTACCAAGCAACACTGCATTTCTGGGACAGGAGTCC
TAGCTCTAGCCATACCCAAGAGAATCTTATCACGGTGCGGATGGAGCAGGCCTTTGCCCG
AAATTTACTAGAGAAGATTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACTCGCTGCTGCTCACCTTCATCTATGGCGGGCGCGTGGTGCATGAGATCCAGGTGCA
CAGCCTAGACTGTCGGCTTGTGGCTGAGCCCTCAGACCCGGAGAGCAGCATGGTGCAGCA
GGTGGTGTTTCCCAGACCTGACCCACTGGAGCCCACCCAGAGCCTGCTGAATCAGCTCGA
GAGAGGCATCCTGGTGGCCAGCAATTCCAGAGGCCTCTTTGTTCAGCGCCTCTGCCCCAT
CCCCATCTCCTGGAACGCACCCGAGGCCCCACCTGGGCCTGGGCCTCATCTGCTGCCCAG
CAATAAGTGTGTGGAGCTCTTCAGTACCACATACTTCTGTAGAGATTTGGCCCAGTACTT
CCAGGGCCAGGGACCTCTACCCAAGTACCAAGCAACACTGCATTTCTGGGACAGGAGTCC
TAGCTCTAGCCATACCCAAGAGAATCTTATCACGGTGCGGATGGAGCAGGCCTTTGCCCG
AAATTTACTAGAGAAGATTCCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               233-351, - strand, RNAz p=0.521424

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               233-351, - strand, RNAz p=0.521424

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               21-351, gnl|bosTau2|chr10 (12347209-12346882)
               

               
               21-351, gnl|Hg17|chr14 (23703684-23704011)
               

               
               21-351, gnl|Mm7|chr14 (50474883-50475210)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-351, gnl|bosTau2|chr10 (12347209-12346882)
               

               
               21-351, gnl|Hg17|chr14 (23703684-23704011)
               

               
               21-351, gnl|Mm7|chr14 (50474883-50475210)

	21-351, gnl\|bosTau2\|chr10 (12347209-12346882)
	21-351, gnl\|Hg17\|chr14 (23703684-23704011)
	21-351, gnl\|Mm7\|chr14 (50474883-50475210)