Ova2-C0003273_C11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACGTACTCCCAGGTGCTTCTCCGCTGCCTCAGTTTACTGCAGAGGCTTCTTCAGGAGCA CCGGCTGAAGACTCAGTCGGAGCTGGACCGCATCAACACGCGGAGTACCTGGAGATCAAG TGCAGTGCTATGATCCTCAAGATGAGGATGGAGGAACTGAAGATTTTGTCTGACACTTAC AGTGCCGAGAAAGTGGAAGTACATCGCCTCATTAGGGACCACTTGGAGGGAGCCATTCGC CTCCAAGAGCAGGACATGGAGAAATCGAGACTGGCCCTGCACACCTATGAGGTCCTGGGA GAAGACTTTGAGAACCTGGTGAAGGAGTACACCCAGCTCAAACTGGCAGCTGAGAACAAG CGCTGGGCCCTCCAGGAGTTTAGCAAGGCCTACCGCTGAGTTGAATGTAGGCAGAACCAG GAAGCATGGATTCTTCATGGCCACCTTCTCTTCCTGCTCAGTGGACCACCTCCACCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACGTACTCCCAGGTGCTTCTCCGCTGCCTCAGTTTACTGCAGAGGCTTCTTCAGGAGCA CCGGCTGAAGACTCAGTCGGAGCTGGACCGCATCAACACGCGGAGTACCTGGAGATCAAG TGCAGTGCTATGATCCTCAAGATGAGGATGGAGGAACTGAAGATTTTGTCTGACACTTAC AGTGCCGAGAAAGTGGAAGTACATCGCCTCATTAGGGACCACTTGGAGGGAGCCATTCGC CTCCAAGAGCAGGACATGGAGAAATCGAGACTGGCCCTGCACACCTATGAGGTCCTGGGA GAAGACTTTGAGAACCTGGTGAAGGAGTACACCCAGCTCAAACTGGCAGCTGAGAACAAG CGCTGGGCCCTCCAGGAGTTTAGCAAGGCCTACCGCTGAGTTGAATGTAGGCAGAACCAG GAAGCATGGATTCTTCATGGCCACCTTCTCTTCCTGCTCAGTGGACCACCTCCACCAC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 11-147, - strand, RNAz p=0.985822 | |
| 212-330, - strand, RNAz p=0.583381 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 11-147, - strand, RNAz p=0.985822 | |
| 212-330, - strand, RNAz p=0.583381 |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 11-147, gnl|bosTau2|chr10 (14095442-14095576) | |
| 11-147, gnl|canFam2|chr8 (6277397-6277481) | |
| 11-147, gnl|canFam2|chr8 (6277397-6277480) | |
| 11-147, gnl|dasNov1|scaffold_16655 (81863-81947) | |
| 11-147, gnl|dasNov1|scaffold_16655 (81863-81946) | |
| 11-147, gnl|echTel1|scaffold_308447 (51668-51579) | |
| 11-147, gnl|echTel1|scaffold_308447 (51668-51580) | |
| 11-147, gnl|hg17|chr1 (167070269-167070352) | |
| 11-147, gnl|hg17|chr14 (22486650-22486734) | |
| 11-147, gnl|Hg17|chr14 (22486783-22486649) | |
| 11-147, gnl|loxAfr1|scaffold_49335 (11875-11791) | |
| 11-147, gnl|loxAfr1|scaffold_49335 (11875-11792) | |
| 11-147, gnl|mm7|chr14 (49409779-49409863) | |
| 11-147, gnl|mm7|chr14 (49409779-49409862) | |
| 11-147, gnl|Mm7|chr14 (49409912-49409778) | |
| 11-147, gnl|monDom2|scaffold_12 (26897696-26897612) | |
| 11-147, gnl|monDom2|scaffold_12 (26897696-26897613) | |
| 11-147, gnl|oryCun1|scaffold_139745 (19408-19492) | |
| 11-147, gnl|oryCun1|scaffold_139745 (19408-19491) | |
| 11-147, gnl|panTro1|chr1 (149344209-149344292) | |
| 11-147, gnl|panTro1|chr15 (21453368-21453452) | |
| 11-147, gnl|rheMac2|chr1 (200061299-200061382) | |
| 11-147, gnl|rheMac2|chr19 (34933792-34933708) | |
| 11-147, gnl|rn3|chr10 (1487655-1487733) | |
| 11-147, gnl|rn3|chr15 (32617619-32617703) | |
| 212-477, gnl|bosTau2|chr10 (14096134-14096400) | |
| 212-477, gnl|canFam2|chr8 (6275571-6275985) | |
| 212-477, gnl|dasNov1|scaffold_16655 (80912-81306) | |
| 212-477, gnl|echTel1|scaffold_308447 (52541-52166) | |
| 212-477, gnl|hg17|chr1 (167069786-167070208) | |
| 212-477, gnl|Hg17|chr14 (22485761-22485495) | |
| 212-477, gnl|loxAfr1|scaffold_49335 (12854-12444) | |
| 212-477, gnl|mm7|chr14 (49407843-49408262) | |
| 212-477, gnl|Mm7|chr14 (49408261-49407996) | |
| 212-477, gnl|monDom2|scaffold_12 (26898685-26898267) | |
| 212-477, gnl|oryCun1|scaffold_139745 (18455-18850) | |
| 212-477, gnl|panTro1|chr1 (149343726-149344148) | |
| 212-477, gnl|rheMac2|chr1 (200060820-200061238) | |
| 212-477, gnl|rn3|chr10 (1487225-1487589) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 11-147, gnl|bosTau2|chr10 (14095442-14095576) | |
| 11-147, gnl|canFam2|chr8 (6277397-6277481) | |
| 11-147, gnl|canFam2|chr8 (6277397-6277480) | |
| 11-147, gnl|dasNov1|scaffold_16655 (81863-81947) | |
| 11-147, gnl|dasNov1|scaffold_16655 (81863-81946) | |
| 11-147, gnl|echTel1|scaffold_308447 (51668-51579) | |
| 11-147, gnl|echTel1|scaffold_308447 (51668-51580) | |
| 11-147, gnl|hg17|chr1 (167070269-167070352) | |
| 11-147, gnl|hg17|chr14 (22486650-22486734) | |
| 11-147, gnl|Hg17|chr14 (22486783-22486649) | |
| 11-147, gnl|loxAfr1|scaffold_49335 (11875-11791) | |
| 11-147, gnl|loxAfr1|scaffold_49335 (11875-11792) | |
| 11-147, gnl|mm7|chr14 (49409779-49409863) | |
| 11-147, gnl|mm7|chr14 (49409779-49409862) | |
| 11-147, gnl|Mm7|chr14 (49409912-49409778) | |
| 11-147, gnl|monDom2|scaffold_12 (26897696-26897612) | |
| 11-147, gnl|monDom2|scaffold_12 (26897696-26897613) | |
| 11-147, gnl|oryCun1|scaffold_139745 (19408-19492) | |
| 11-147, gnl|oryCun1|scaffold_139745 (19408-19491) | |
| 11-147, gnl|panTro1|chr1 (149344209-149344292) | |
| 11-147, gnl|panTro1|chr15 (21453368-21453452) | |
| 11-147, gnl|rheMac2|chr1 (200061299-200061382) | |
| 11-147, gnl|rheMac2|chr19 (34933792-34933708) | |
| 11-147, gnl|rn3|chr10 (1487655-1487733) | |
| 11-147, gnl|rn3|chr15 (32617619-32617703) | |
| 212-477, gnl|bosTau2|chr10 (14096134-14096400) | |
| 212-477, gnl|canFam2|chr8 (6275571-6275985) | |
| 212-477, gnl|dasNov1|scaffold_16655 (80912-81306) | |
| 212-477, gnl|echTel1|scaffold_308447 (52541-52166) | |
| 212-477, gnl|hg17|chr1 (167069786-167070208) | |
| 212-477, gnl|Hg17|chr14 (22485761-22485495) | |
| 212-477, gnl|loxAfr1|scaffold_49335 (12854-12444) | |
| 212-477, gnl|mm7|chr14 (49407843-49408262) | |
| 212-477, gnl|Mm7|chr14 (49408261-49407996) | |
| 212-477, gnl|monDom2|scaffold_12 (26898685-26898267) | |
| 212-477, gnl|oryCun1|scaffold_139745 (18455-18850) | |
| 212-477, gnl|panTro1|chr1 (149343726-149344148) | |
| 212-477, gnl|rheMac2|chr1 (200060820-200061238) | |
| 212-477, gnl|rn3|chr10 (1487225-1487589) |