Non-Coding RNA Search

Ova2-C0003273_D18

Sequence:


               
               GGACATCTTGAATTGCTGACCACGGCCAGTCTTTTTTATGCATACAGAAAAGTGTTTTTG
TAAGAACTTTCTCACAGTTTCTAGATATTTTTTAAAAATCTGAACGCTGAGGAGAAGGAA
GGGGGTGGTGTTTTCCCCCAGCAGCAGCCGCATGATGGCTGGGTCTGAAATCCCAAAAGG
ATCCAGCCTGATGTCCTCGCAGTTGCACATGTGGGGAAAAACAAGCCCATCTCCCTTCTC
TTCCACCTTTTTTACAAACAGTCAAGGCTCAGTATTCCTCAGCTCTGTCCTGGGCTCCAC
ACTCCCAAGATTTGCCTTGAACTCAGCCGCATGGAAACCTGACATCAGCCCGGTCCCTGT
GTGCCATTTCTTTCCCTGGCCTCACCCGGGGCTCAGGCTTCAACCATGCAGAGGAGGAAG
GCAGGTAGACTTTTCCTGAGTCCTACTCCCCCGCCTGGACCTGGGGTGCCACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACATCTTGAATTGCTGACCACGGCCAGTCTTTTTTATGCATACAGAAAAGTGTTTTTG
TAAGAACTTTCTCACAGTTTCTAGATATTTTTTAAAAATCTGAACGCTGAGGAGAAGGAA
GGGGGTGGTGTTTTCCCCCAGCAGCAGCCGCATGATGGCTGGGTCTGAAATCCCAAAAGG
ATCCAGCCTGATGTCCTCGCAGTTGCACATGTGGGGAAAAACAAGCCCATCTCCCTTCTC
TTCCACCTTTTTTACAAACAGTCAAGGCTCAGTATTCCTCAGCTCTGTCCTGGGCTCCAC
ACTCCCAAGATTTGCCTTGAACTCAGCCGCATGGAAACCTGACATCAGCCCGGTCCCTGT
GTGCCATTTCTTTCCCTGGCCTCACCCGGGGCTCAGGCTTCAACCATGCAGAGGAGGAAG
GCAGGTAGACTTTTCCTGAGTCCTACTCCCCCGCCTGGACCTGGGGTGCCACAT

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               144-203, , RaveNnA Score=21.66

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               144-203, , RaveNnA Score=21.66