Non-Coding RNA Search

Ova2-C0003273_E17

Sequence:


               
               GCGCGGTGAGGAGCTCGTGTTCATACTTGGAGCTATGCCGTCCAAGGGTCCGCTGCAGTC
CGTTCAAGTCTTCGGACGCAAGAAAACAGCCACAGCTGTGGCCCACTGCAAACGAGGAAA
TGGGCTCATCAAGGTGAATGGACGTCCCCTGAAGATGATCGAGCCGCGCACGCTGAATGA
CAAGTTACTGGAGCCTGTTCTGCTTCTGGGCAAGGAGAGATTTGCTGGTGTGGATATCCG
GATCCGTGTGAACGGTGGTGGTCATGTGGCCCAAATTTATGCTATCCGGGAGTCTATCTC
AGAAGCTCTGGTGGATTATTACGAAAAATATGTGGATGAAGCCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCGGTGAGGAGCTCGTGTTCATACTTGGAGCTATGCCGTCCAAGGGTCCGCTGCAGTC
CGTTCAAGTCTTCGGACGCAAGAAAACAGCCACAGCTGTGGCCCACTGCAAACGAGGAAA
TGGGCTCATCAAGGTGAATGGACGTCCCCTGAAGATGATCGAGCCGCGCACGCTGAATGA
CAAGTTACTGGAGCCTGTTCTGCTTCTGGGCAAGGAGAGATTTGCTGGTGTGGATATCCG
GATCCGTGTGAACGGTGGTGGTCATGTGGCCCAAATTTATGCTATCCGGGAGTCTATCTC
AGAAGCTCTGGTGGATTATTACGAAAAATATGTGGATGAAGCCTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|39850096|gb|AAH64030.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|39850096|gb|AAH64030.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-159, - strand, RNAz p=0.878755

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, - strand, RNAz p=0.878755

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-345, gnl|bosTau2|chr3 (83933643-83933984)
               

               
               1-345, gnl|Hg17|chr19 (20096819-20097163)
               

               
               1-345, gnl|Mm7|chr5 (128366382-128366038)
               


               
               7-337, gnl|bosTau2|chr11 (35260736-35261066)
               

               
               7-337, gnl|Hg17|chr19 (20096825-20097155)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-345, gnl|bosTau2|chr3 (83933643-83933984)
               

               
               1-345, gnl|Hg17|chr19 (20096819-20097163)
               

               
               1-345, gnl|Mm7|chr5 (128366382-128366038)
               


               
               7-337, gnl|bosTau2|chr11 (35260736-35261066)
               

               
               7-337, gnl|Hg17|chr19 (20096825-20097155)

	1-345, gnl\|bosTau2\|chr3 (83933643-83933984)
	1-345, gnl\|Hg17\|chr19 (20096819-20097163)
	1-345, gnl\|Mm7\|chr5 (128366382-128366038)

	7-337, gnl\|bosTau2\|chr11 (35260736-35261066)
	7-337, gnl\|Hg17\|chr19 (20096825-20097155)