Ova2-C0003273_M06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAaccgtgtggttgctgggaattgaactcaggacctctggaggagcaatcagtactctta actgctgagccatctTGCCCTTGTGGATCATAACAATAATTGCATGTAGGTTTAGTTTCT CAGACTTAAAGCAAATTGGATTACAGTGGCTTTTTTTTTTTTTTTCTTCTTTGGTTCATT CCACAATTACCAGGTTGTTTAAGTCCAGTCTAGTTGCATTGTTTTTCCAGTGACCATGAG CAGAAGAGTGGGATTAAATAAGGAAGTGAGCTGTATTGGACAGGAATTGAGCAATGCAAG CTGAGTTCTTTGCACATGTCTTTTCAGTGAGTATCTCGCTGTCTTTAAGAAGACTGTGTC CTCACATGAAGTCTTTCTTCAGCGGCTTTCTTCTCACCCTGTTCTCAGTAAAGACCGAAA CTTCCATGTTTTCTTGGAATATGATCAGGATGTAAGGCAATTTTTCTGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAaccgtgtggttgctgggaattgaactcaggacctctggaggagcaatcagtactctta actgctgagccatctTGCCCTTGTGGATCATAACAATAATTGCATGTAGGTTTAGTTTCT CAGACTTAAAGCAAATTGGATTACAGTGGCTTTTTTTTTTTTTTTCTTCTTTGGTTCATT CCACAATTACCAGGTTGTTTAAGTCCAGTCTAGTTGCATTGTTTTTCCAGTGACCATGAG CAGAAGAGTGGGATTAAATAAGGAAGTGAGCTGTATTGGACAGGAATTGAGCAATGCAAG CTGAGTTCTTTGCACATGTCTTTTCAGTGAGTATCTCGCTGTCTTTAAGAAGACTGTGTC CTCACATGAAGTCTTTCTTCAGCGGCTTTCTTCTCACCCTGTTCTCAGTAAAGACCGAAA CTTCCATGTTTTCTTGGAATATGATCAGGATGTAAGGCAATTTTTCTGTT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 322-441, - strand, RNAz p=0.717591 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 322-441, - strand, RNAz p=0.717591 |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 322-463, gnl|bosTau2|chr13 (21939656-21939515) | |
| 322-463, gnl|canFam2|chr18 (54438082-54437951) | |
| 322-463, gnl|canFam2|chr24 (8099297-8099420) | |
| 322-463, gnl|canFam2|chr24 (8099445-8099287) | |
| 322-463, gnl|danRer3|chr13 (34307400-34307277) | |
| 322-463, gnl|danRer3|chr13 (34307260-34307411) | |
| 322-463, gnl|danRer3|chr13 (34307403-34307272) | |
| 322-463, gnl|dasNov1|scaffold_12413 (40068-40226) | |
| 322-463, gnl|dasNov1|scaffold_30955 (11298-11167) | |
| 322-463, gnl|dasNov1|scaffold_41526 (1634-1515) | |
| 322-463, gnl|echTel1|scaffold_240104 (5035-5166) | |
| 322-463, gnl|echTel1|scaffold_299371 (1398-1275) | |
| 322-463, gnl|echTel1|scaffold_299371 (1253-1408) | |
| 322-463, gnl|fr1|chrUn (117790131-117790254) | |
| 322-463, gnl|fr1|chrUn (117790259-117790120) | |
| 322-463, gnl|fr1|chrUn (93236871-93236740) | |
| 322-463, gnl|galGal2|chr14 (16770652-16770809) | |
| 322-463, gnl|hg17|chr11 (65374476-65374607) | |
| 322-463, gnl|hg17|chr12 (99964657-99964780) | |
| 322-463, gnl|hg17|chr20 (17881208-17881366) | |
| 322-463, gnl|Hg17|chr20 (17881360-17881219) | |
| 322-463, gnl|loxAfr1|scaffold_35192 (12147-12270) | |
| 322-463, gnl|loxAfr1|scaffold_35192 (12294-12137) | |
| 322-463, gnl|loxAfr1|scaffold_35192 (12144-12275) | |
| 322-463, gnl|mm7|chr19 (5392838-5392707) | |
| 322-463, gnl|mm7|chr2 (143998851-143998728) | |
| 322-463, gnl|mm7|chr2 (143998706-143998862) | |
| 322-463, gnl|Mm7|chr2 (143998856-143998715) | |
| 322-463, gnl|monDom2|scaffold_1 (52706572-52706450) | |
| 322-463, gnl|monDom2|scaffold_1 (52706426-52706583) | |
| 322-463, gnl|monDom2|scaffold_107 (3029852-3029721) | |
| 322-463, gnl|oryCun1|scaffold_171178 (7584-7475) | |
| 322-463, gnl|oryCun1|scaffold_202584 (90192-90069) | |
| 322-463, gnl|oryCun1|scaffold_202584 (90045-90203) | |
| 322-463, gnl|panTro1|chr10 (102412859-102412982) | |
| 322-463, gnl|panTro1|chr21 (17733598-17733756) | |
| 322-463, gnl|panTro1|chr9 (66620797-66620928) | |
| 322-463, gnl|rheMac2|chr10 (51274044-51274202) | |
| 322-463, gnl|rheMac2|chr11 (102267089-102267212) | |
| 322-463, gnl|rheMac2|chr14 (8604146-8604015) | |
| 322-463, gnl|rn3|chr1 (208294598-208294467) | |
| 322-463, gnl|rn3|chr3 (132691540-132691417) | |
| 322-463, gnl|rn3|chr3 (132691395-132691551) | |
| 322-463, gnl|tetNig1|chr17 (2866576-2866699) | |
| 322-463, gnl|tetNig1|chr17 (2866704-2866565) | |
| 322-463, gnl|tetNig1|chrUn_random (83011696-83011827) | |
| 322-463, gnl|xenTro1|scaffold_117 (942841-942972) | |
| 322-463, gnl|xenTro1|scaffold_582 (121316-121158) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 322-463, gnl|bosTau2|chr13 (21939656-21939515) | |
| 322-463, gnl|canFam2|chr18 (54438082-54437951) | |
| 322-463, gnl|canFam2|chr24 (8099297-8099420) | |
| 322-463, gnl|canFam2|chr24 (8099445-8099287) | |
| 322-463, gnl|danRer3|chr13 (34307400-34307277) | |
| 322-463, gnl|danRer3|chr13 (34307260-34307411) | |
| 322-463, gnl|danRer3|chr13 (34307403-34307272) | |
| 322-463, gnl|dasNov1|scaffold_12413 (40068-40226) | |
| 322-463, gnl|dasNov1|scaffold_30955 (11298-11167) | |
| 322-463, gnl|dasNov1|scaffold_41526 (1634-1515) | |
| 322-463, gnl|echTel1|scaffold_240104 (5035-5166) | |
| 322-463, gnl|echTel1|scaffold_299371 (1398-1275) | |
| 322-463, gnl|echTel1|scaffold_299371 (1253-1408) | |
| 322-463, gnl|fr1|chrUn (117790131-117790254) | |
| 322-463, gnl|fr1|chrUn (117790259-117790120) | |
| 322-463, gnl|fr1|chrUn (93236871-93236740) | |
| 322-463, gnl|galGal2|chr14 (16770652-16770809) | |
| 322-463, gnl|hg17|chr11 (65374476-65374607) | |
| 322-463, gnl|hg17|chr12 (99964657-99964780) | |
| 322-463, gnl|hg17|chr20 (17881208-17881366) | |
| 322-463, gnl|Hg17|chr20 (17881360-17881219) | |
| 322-463, gnl|loxAfr1|scaffold_35192 (12147-12270) | |
| 322-463, gnl|loxAfr1|scaffold_35192 (12294-12137) | |
| 322-463, gnl|loxAfr1|scaffold_35192 (12144-12275) | |
| 322-463, gnl|mm7|chr19 (5392838-5392707) | |
| 322-463, gnl|mm7|chr2 (143998851-143998728) | |
| 322-463, gnl|mm7|chr2 (143998706-143998862) | |
| 322-463, gnl|Mm7|chr2 (143998856-143998715) | |
| 322-463, gnl|monDom2|scaffold_1 (52706572-52706450) | |
| 322-463, gnl|monDom2|scaffold_1 (52706426-52706583) | |
| 322-463, gnl|monDom2|scaffold_107 (3029852-3029721) | |
| 322-463, gnl|oryCun1|scaffold_171178 (7584-7475) | |
| 322-463, gnl|oryCun1|scaffold_202584 (90192-90069) | |
| 322-463, gnl|oryCun1|scaffold_202584 (90045-90203) | |
| 322-463, gnl|panTro1|chr10 (102412859-102412982) | |
| 322-463, gnl|panTro1|chr21 (17733598-17733756) | |
| 322-463, gnl|panTro1|chr9 (66620797-66620928) | |
| 322-463, gnl|rheMac2|chr10 (51274044-51274202) | |
| 322-463, gnl|rheMac2|chr11 (102267089-102267212) | |
| 322-463, gnl|rheMac2|chr14 (8604146-8604015) | |
| 322-463, gnl|rn3|chr1 (208294598-208294467) | |
| 322-463, gnl|rn3|chr3 (132691540-132691417) | |
| 322-463, gnl|rn3|chr3 (132691395-132691551) | |
| 322-463, gnl|tetNig1|chr17 (2866576-2866699) | |
| 322-463, gnl|tetNig1|chr17 (2866704-2866565) | |
| 322-463, gnl|tetNig1|chrUn_random (83011696-83011827) | |
| 322-463, gnl|xenTro1|scaffold_117 (942841-942972) | |
| 322-463, gnl|xenTro1|scaffold_582 (121316-121158) |