Non-Coding RNA Search

Ova2-C0003274_E21

Sequence:


               
               GGAGATTGCAAAGAAGCACTGTTCTACACTCCAGACCCCAGACCTCCAGACCTGAGGTCC
GACAACACCCAATGGAAGACAAAAAGAAGAAACGGAGTCCTAAGCCCTGTCTGACCCAAC
CAGCCCAGGCCCCAGGCACACTGCGCAGAGTCCCTGTGCCCACCAGCCATAGTGGCTCCT
TGGCCCTGGGACTCCCTCATTTGCTGTCACCCAAGCAGCGAGCCAAGTTCAAGAGAGTAG
GCAAGGAGAAATGCCGCCCCGTGCTGGCTGGAGGTGGAGGCGGCTCTGCGGGCACACCCT
TGCAACACTCCTTCCTGACTGAAGTGACAGACGTCTATGAGATGGAGGGAGGGCTACTGA
ACTTGCTCAATGATTTCCATTCAGGCCGCCTGCAGGCCTTTGGGAAAGAATGTTCCTTCG
AGCAGCTGGAGCACGTTCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGATTGCAAAGAAGCACTGTTCTACACTCCAGACCCCAGACCTCCAGACCTGAGGTCC
GACAACACCCAATGGAAGACAAAAAGAAGAAACGGAGTCCTAAGCCCTGTCTGACCCAAC
CAGCCCAGGCCCCAGGCACACTGCGCAGAGTCCCTGTGCCCACCAGCCATAGTGGCTCCT
TGGCCCTGGGACTCCCTCATTTGCTGTCACCCAAGCAGCGAGCCAAGTTCAAGAGAGTAG
GCAAGGAGAAATGCCGCCCCGTGCTGGCTGGAGGTGGAGGCGGCTCTGCGGGCACACCCT
TGCAACACTCCTTCCTGACTGAAGTGACAGACGTCTATGAGATGGAGGGAGGGCTACTGA
ACTTGCTCAATGATTTCCATTCAGGCCGCCTGCAGGCCTTTGGGAAAGAATGTTCCTTCG
AGCAGCTGGAGCACGTTCGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26390135|dbj|BAC25848.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26390135|dbj|BAC25848.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               88-207, - strand, RNAz p=0.923234

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               88-207, - strand, RNAz p=0.923234

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               51-241, gnl|bosTau2|chr2 (73496519-73496709)
               

               
               51-241, gnl|Hg17|chr1 (32336608-32336798)
               

               
               51-241, gnl|Mm7|chr4 (129067433-129067242)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-241, gnl|bosTau2|chr2 (73496519-73496709)
               

               
               51-241, gnl|Hg17|chr1 (32336608-32336798)
               

               
               51-241, gnl|Mm7|chr4 (129067433-129067242)

	51-241, gnl\|bosTau2\|chr2 (73496519-73496709)
	51-241, gnl\|Hg17\|chr1 (32336608-32336798)
	51-241, gnl\|Mm7\|chr4 (129067433-129067242)