Ova2-C0003274_F05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGCCTCCATCAGCTAACGGAAACACTCATCCACAAACAGAGCCTGCTGGAGAGACTCA GCACAAATAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTCGAGCAGCAGCTGCGCTCTG CCGCCACGGGGCCCAGCAACGGATCCTCCATTAACATGTATGGAGTTGACAGTGGTGAAG GGACACGCACTGCGAAATGTTCCTGTTCTTTTTAATGACACAGAAACTAATGCTAGCAGG AATGATATGGGAAGGTTCGCAAAGCTGCTAGCTCCATTGACCAATTTAGTATTCGCCTGG TAATTGTCCTCCGCGAGATACCCCATAGCACGAGGTGTTTGTGATTATCTATATGGCTTT GCTTCACCTCTGGGTCATGATTGTACTGCTGACGCTACTCACCAGAAATGCACCATGACC AATCATATGGCAAGTGAGCTGAGCCGCTGGCTCCCATGAGTGCCTGCCATTGTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGCCTCCATCAGCTAACGGAAACACTCATCCACAAACAGAGCCTGCTGGAGAGACTCA GCACAAATAAGAACTCCCTGGTCTTCCAGCTGGAGCGCCTCGAGCAGCAGCTGCGCTCTG CCGCCACGGGGCCCAGCAACGGATCCTCCATTAACATGTATGGAGTTGACAGTGGTGAAG GGACACGCACTGCGAAATGTTCCTGTTCTTTTTAATGACACAGAAACTAATGCTAGCAGG AATGATATGGGAAGGTTCGCAAAGCTGCTAGCTCCATTGACCAATTTAGTATTCGCCTGG TAATTGTCCTCCGCGAGATACCCCATAGCACGAGGTGTTTGTGATTATCTATATGGCTTT GCTTCACCTCTGGGTCATGATTGTACTGCTGACGCTACTCACCAGAAATGCACCATGACC AATCATATGGCAAGTGAGCTGAGCCGCTGGCTCCCATGAGTGCCTGCCATTGTCC |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 3-121, - strand, RNAz p=0.609463 | |
| 31-150, - strand, RNAz p=0.52256 | |
| 43-181, - strand, RNAz p=0.957676 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-121, - strand, RNAz p=0.609463 | |
| 31-150, - strand, RNAz p=0.52256 | |
| 43-181, - strand, RNAz p=0.957676 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 3-181, gnl|bosTau2|chr21 (36184151-36183973) | |
| 3-181, gnl|canFam2|chr8 (4899085-4899317) | |
| 3-181, gnl|canFam2|chr8 (4899315-4899208) | |
| 3-181, gnl|danRer3|chr13 (34510797-34511015) | |
| 3-181, gnl|dasNov1|scaffold_7020 (493-725) | |
| 3-181, gnl|dasNov1|scaffold_7020 (723-616) | |
| 3-181, gnl|echTel1|scaffold_285863 (26732-26500) | |
| 3-181, gnl|echTel1|scaffold_285863 (26505-26609) | |
| 3-181, gnl|fr1|chrUn (262959978-262959748) | |
| 3-181, gnl|fr1|chrUn (262959769-262959858) | |
| 3-181, gnl|galGal2|chr5 (41658978-41659210) | |
| 3-181, gnl|hg17|chr14 (92369217-92369449) | |
| 3-181, gnl|Hg17|chr14 (92369268-92369446) | |
| 3-181, gnl|hg17|chr5 (39205315-39205422) | |
| 3-181, gnl|mm7|chr12 (99987304-99987536) | |
| 3-181, gnl|mm7|chr12 (99987534-99987427) | |
| 3-181, gnl|Mm7|chr12 (99987355-99987533) | |
| 3-181, gnl|monDom2|scaffold_8 (30989877-30990106) | |
| 3-181, gnl|monDom2|scaffold_8 (30990104-30990000) | |
| 3-181, gnl|oryCun1|scaffold_178453 (81690-81915) | |
| 3-181, gnl|oryCun1|scaffold_178453 (81918-81813) | |
| 3-181, gnl|panTro1|chr15 (92772678-92772910) | |
| 3-181, gnl|panTro1|chr4 (77519303-77519196) | |
| 3-181, gnl|rheMac2|chr6 (38993024-38993131) | |
| 3-181, gnl|rheMac2|chr7 (156035328-156035560) | |
| 3-181, gnl|rn3|chr6 (126763550-126763782) | |
| 3-181, gnl|rn3|chr6 (126763780-126763673) | |
| 3-181, gnl|tetNig1|chr10 (11514715-11514919) | |
| 3-181, gnl|tetNig1|chr10 (11514919-11514835) | |
| 3-181, gnl|xenTro1|scaffold_22 (3072666-3072898) | |
| 3-181, gnl|xenTro1|scaffold_22 (3072896-3072789) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-181, gnl|bosTau2|chr21 (36184151-36183973) | |
| 3-181, gnl|canFam2|chr8 (4899085-4899317) | |
| 3-181, gnl|canFam2|chr8 (4899315-4899208) | |
| 3-181, gnl|danRer3|chr13 (34510797-34511015) | |
| 3-181, gnl|dasNov1|scaffold_7020 (493-725) | |
| 3-181, gnl|dasNov1|scaffold_7020 (723-616) | |
| 3-181, gnl|echTel1|scaffold_285863 (26732-26500) | |
| 3-181, gnl|echTel1|scaffold_285863 (26505-26609) | |
| 3-181, gnl|fr1|chrUn (262959978-262959748) | |
| 3-181, gnl|fr1|chrUn (262959769-262959858) | |
| 3-181, gnl|galGal2|chr5 (41658978-41659210) | |
| 3-181, gnl|hg17|chr14 (92369217-92369449) | |
| 3-181, gnl|Hg17|chr14 (92369268-92369446) | |
| 3-181, gnl|hg17|chr5 (39205315-39205422) | |
| 3-181, gnl|mm7|chr12 (99987304-99987536) | |
| 3-181, gnl|mm7|chr12 (99987534-99987427) | |
| 3-181, gnl|Mm7|chr12 (99987355-99987533) | |
| 3-181, gnl|monDom2|scaffold_8 (30989877-30990106) | |
| 3-181, gnl|monDom2|scaffold_8 (30990104-30990000) | |
| 3-181, gnl|oryCun1|scaffold_178453 (81690-81915) | |
| 3-181, gnl|oryCun1|scaffold_178453 (81918-81813) | |
| 3-181, gnl|panTro1|chr15 (92772678-92772910) | |
| 3-181, gnl|panTro1|chr4 (77519303-77519196) | |
| 3-181, gnl|rheMac2|chr6 (38993024-38993131) | |
| 3-181, gnl|rheMac2|chr7 (156035328-156035560) | |
| 3-181, gnl|rn3|chr6 (126763550-126763782) | |
| 3-181, gnl|rn3|chr6 (126763780-126763673) | |
| 3-181, gnl|tetNig1|chr10 (11514715-11514919) | |
| 3-181, gnl|tetNig1|chr10 (11514919-11514835) | |
| 3-181, gnl|xenTro1|scaffold_22 (3072666-3072898) | |
| 3-181, gnl|xenTro1|scaffold_22 (3072896-3072789) |