Non-Coding RNA Search

Ova2-C0003274_I02

Sequence:


               
               CTAAACATGGCGCTGGCCAGCGTTGTTGCAGCGGCCGATGCCGGTGAATCAGCACGGGTT
TTTTGGACTCCGACGTCGTGCAGATCTGCTGGACTTGGGTCCAGGGAGTCCTGGTGATGG
GCTGAGCCTAGCCGCGCCCAGCTGGGGTGTCCCGGAGGAGCCACCAATCTCAATGCTTCA
TGGAACCACCGCCCTGGTCTTCAAGTTTCAGCATGGAGTCATTGTTGCAGCGGATTCCCG
GGCCACCGCATGTGCCTACATTGCTTCCCAGACAGTGAACAAAGTGATAGAGATCAACCC
TTACCTTCTGGGCACCATGGCTGGCGGTGCAACGGATTGCAGCTTCTGGGAGCGGTGTGT
TGGCTCGACAGTGTCGAATCTATGAGCTTCGCAACAGGAACGCATCTCGGTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAAACATGGCGCTGGCCAGCGTTGTTGCAGCGGCCGATGCCGGTGAATCAGCACGGGTT
TTTTGGACTCCGACGTCGTGCAGATCTGCTGGACTTGGGTCCAGGGAGTCCTGGTGATGG
GCTGAGCCTAGCCGCGCCCAGCTGGGGTGTCCCGGAGGAGCCACCAATCTCAATGCTTCA
TGGAACCACCGCCCTGGTCTTCAAGTTTCAGCATGGAGTCATTGTTGCAGCGGATTCCCG
GGCCACCGCATGTGCCTACATTGCTTCCCAGACAGTGAACAAAGTGATAGAGATCAACCC
TTACCTTCTGGGCACCATGGCTGGCGGTGCAACGGATTGCAGCTTCTGGGAGCGGTGTGT
TGGCTCGACAGTGTCGAATCTATGAGCTTCGCAACAGGAACGCATCTCGGTCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q86T01_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q86T01_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-159, + strand, RNAz p=0.72559

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, + strand, RNAz p=0.72559

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               49-120, + strand, RNAmicro p=0.998051

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               49-120, + strand, RNAmicro p=0.998051

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of BC057840, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC057840, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-211, gnl|bosTau2|chr10 (14022248-14022457)
               

               
               1-211, gnl|Hg17|chr14 (22573936-22573727)
               

               
               1-211, gnl|Mm7|chr14 (49484564-49484355)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-211, gnl|bosTau2|chr10 (14022248-14022457)
               

               
               1-211, gnl|Hg17|chr14 (22573936-22573727)
               

               
               1-211, gnl|Mm7|chr14 (49484564-49484355)

	1-211, gnl\|bosTau2\|chr10 (14022248-14022457)
	1-211, gnl\|Hg17\|chr14 (22573936-22573727)
	1-211, gnl\|Mm7\|chr14 (49484564-49484355)