Non-Coding RNA Search

Ova2-C0003274_I12

Sequence:


               
               CGGCAGTGTAGCGGGATGGTTCCTAGGTGTCAGATCGAAGTGTTGTATTTTGCAAAAAGT
GCTGAAATCGCTGGCGTTCGCTCCGAGACCATCTCTGTGCCACAGGAAATCAAGGCATCA
CAGCTGTGGCAGGAGCTAGAGACTCTCCATCCTGGGTTGGCTGATGTTAGAAACCAGGTG
ATATTTGCTGTTCGTCAAGAGTATGTCGAGCTTGGAGATCAACAACTCCTGCTTCAGCCT
GGAGACGAAGTTGCCATCATCCCACCAATCAGTGGAGGATAGTGCGTCTGAGCCATCGGG
GTATGAGGCGAAGGACCCTCCACAGGATACCTTGAAAGATGTGGATGATGTGCTGGAGAA
ACCTAAGGACATAATACAGTTCACTGCCAAGAAGCTCTCAGTGGGGGAAGTGTCACAGCT
GGTGGTGTCCCCTCTGTGTGGCGCAGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTT
CGAAAGGCAGAAAGTCATTAGCTTAGAATATGAAGCATATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCAGTGTAGCGGGATGGTTCCTAGGTGTCAGATCGAAGTGTTGTATTTTGCAAAAAGT
GCTGAAATCGCTGGCGTTCGCTCCGAGACCATCTCTGTGCCACAGGAAATCAAGGCATCA
CAGCTGTGGCAGGAGCTAGAGACTCTCCATCCTGGGTTGGCTGATGTTAGAAACCAGGTG
ATATTTGCTGTTCGTCAAGAGTATGTCGAGCTTGGAGATCAACAACTCCTGCTTCAGCCT
GGAGACGAAGTTGCCATCATCCCACCAATCAGTGGAGGATAGTGCGTCTGAGCCATCGGG
GTATGAGGCGAAGGACCCTCCACAGGATACCTTGAAAGATGTGGATGATGTGCTGGAGAA
ACCTAAGGACATAATACAGTTCACTGCCAAGAAGCTCTCAGTGGGGGAAGTGTCACAGCT
GGTGGTGTCCCCTCTGTGTGGCGCAGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTT
CGAAAGGCAGAAAGTCATTAGCTTAGAATATGAAGCATATCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               MOS2S_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               MOS2S_MOUSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               329-432, - strand, RNAz p=0.804151

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               329-432, - strand, RNAz p=0.804151

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               11-315, gnl|bosTau2|chr12 (2857547-2857243)
               

               
               11-315, gnl|Hg17|chr5 (52440233-52433797)
               

               
               11-315, gnl|Mm7|chr13 (111991650-111996898)
               


               
               329-522, gnl|bosTau2|chr12 (2857263-2857069)
               

               
               329-522, gnl|Hg17|chr5 (52438669-52433036)
               

               
               329-522, gnl|Mm7|chr13 (111993258-111997588)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-315, gnl|bosTau2|chr12 (2857547-2857243)
               

               
               11-315, gnl|Hg17|chr5 (52440233-52433797)
               

               
               11-315, gnl|Mm7|chr13 (111991650-111996898)
               


               
               329-522, gnl|bosTau2|chr12 (2857263-2857069)
               

               
               329-522, gnl|Hg17|chr5 (52438669-52433036)
               

               
               329-522, gnl|Mm7|chr13 (111993258-111997588)

	11-315, gnl\|bosTau2\|chr12 (2857547-2857243)
	11-315, gnl\|Hg17\|chr5 (52440233-52433797)
	11-315, gnl\|Mm7\|chr13 (111991650-111996898)

	329-522, gnl\|bosTau2\|chr12 (2857263-2857069)
	329-522, gnl\|Hg17\|chr5 (52438669-52433036)
	329-522, gnl\|Mm7\|chr13 (111993258-111997588)