Non-Coding RNA Search

Ova2-C0003275_A19

Sequence:


               
               CATCCTGGAGCTGCCCTGCCCCCAGCTGTCAGCACTGGCCTCTTACCACTGGAGTCACGG
CAAAGCCAAAATCCCAGAAGCCTCTTCTACTGTCTATAATGGCTCCCTCTTGTTGCTGCC
ACAAGATGGCGTTGGGGGCCTCTACCAGTGCGTGGCCACTGAAAACGGCTATTCGTACCC
TGTAGTCTCCTACTGGGTAGACAGCCAGGACCAGCCCCTGGCACTGGATCCTGAGCTGGC
GGGCGTTCCCCGGGAGCGAGTGCAGGTCCCACTGACCAGGGTCGGAGGCGGGGCTTCTAT
GGCTGCCCAGCGGTCCTACTGGCCCCATTTTCTCATCGTTACTGTCCTCCTGGCCATTGT
GCTCTTGGGAGTGCTCACTCTCCTCCTTGCTTCCCCACTGGGAGTGCTTCGGGCTCGGGG
TAAGGTTCAGGGCTGTGGGATGCTGCCCCCAGGGAAAAGGCCCCACTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCCTGGAGCTGCCCTGCCCCCAGCTGTCAGCACTGGCCTCTTACCACTGGAGTCACGG
CAAAGCCAAAATCCCAGAAGCCTCTTCTACTGTCTATAATGGCTCCCTCTTGTTGCTGCC
ACAAGATGGCGTTGGGGGCCTCTACCAGTGCGTGGCCACTGAAAACGGCTATTCGTACCC
TGTAGTCTCCTACTGGGTAGACAGCCAGGACCAGCCCCTGGCACTGGATCCTGAGCTGGC
GGGCGTTCCCCGGGAGCGAGTGCAGGTCCCACTGACCAGGGTCGGAGGCGGGGCTTCTAT
GGCTGCCCAGCGGTCCTACTGGCCCCATTTTCTCATCGTTACTGTCCTCCTGGCCATTGT
GCTCTTGGGAGTGCTCACTCTCCTCCTTGCTTCCCCACTGGGAGTGCTTCGGGCTCGGGG
TAAGGTTCAGGGCTGTGGGATGCTGCCCCCAGGGAAAAGGCCCCACTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61824130|ref|XP_610912.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61824130|ref|XP_610912.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-159, + strand, RNAz p=0.750299

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, + strand, RNAz p=0.750299

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-469, gnl|bosTau2|chr3 (10456239-10455770)
               

               
               1-469, gnl|Hg17|chr1 (152959297-152959766)
               

               
               1-469, gnl|Mm7|chr3 (88551025-88550556)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-469, gnl|bosTau2|chr3 (10456239-10455770)
               

               
               1-469, gnl|Hg17|chr1 (152959297-152959766)
               

               
               1-469, gnl|Mm7|chr3 (88551025-88550556)

	1-469, gnl\|bosTau2\|chr3 (10456239-10455770)
	1-469, gnl\|Hg17\|chr1 (152959297-152959766)
	1-469, gnl\|Mm7\|chr3 (88551025-88550556)