Non-Coding RNA Search

Ova2-C0003275_B18

Sequence:


               
               TGGCCTCAGAGTGCTCTGCACAGTCCTGGTGAAGTGCACTGGTCTAGCCCTCATCTGGAG
CCTGTGTCCCTCTTCCCACCCTGTAGTGGCTCCGGGTACTGCCCTGTAAGCATGAGTTCC
ACCGAGACTGCGTAGACCCCTGGCTGATGCTACAACAGACCTGCCCACTGTGCAAGTTCA
ATGTCCTGGGTGAGCACCAGGGGCCAGGTGGGATCCTGGGCTAACTCCCTAAGCCCCACC
TGATACCTCTCTCCCTGTCCTTCCTTTCCCTACAGGGAACCACTACTCAGATGACTAACT
CCCCAGTGGAGAGTCTGCACATCGGGATGGACCCTTCCCAGCCTACACTACAGGAGAGTG
GGATGGGCAGACCAGCTAGCCCTGTGGGCAAAGGAAAAGGTCCACCCATGCCATGATGGA
TAGGAGGGACTCGCACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCCTCAGAGTGCTCTGCACAGTCCTGGTGAAGTGCACTGGTCTAGCCCTCATCTGGAG
CCTGTGTCCCTCTTCCCACCCTGTAGTGGCTCCGGGTACTGCCCTGTAAGCATGAGTTCC
ACCGAGACTGCGTAGACCCCTGGCTGATGCTACAACAGACCTGCCCACTGTGCAAGTTCA
ATGTCCTGGGTGAGCACCAGGGGCCAGGTGGGATCCTGGGCTAACTCCCTAAGCCCCACC
TGATACCTCTCTCCCTGTCCTTCCTTTCCCTACAGGGAACCACTACTCAGATGACTAACT
CCCCAGTGGAGAGTCTGCACATCGGGATGGACCCTTCCCAGCCTACACTACAGGAGAGTG
GGATGGGCAGACCAGCTAGCCCTGTGGGCAAAGGAAAAGGTCCACCCATGCCATGATGGA
TAGGAGGGACTCGCACCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               198-309, - strand, RNAz p=0.968709

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-309, - strand, RNAz p=0.968709

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               79-334, gnl|bosTau2|chr17 (42576765-42576504)
               

               
               79-334, gnl|Hg17|chr22 (29100364-29100108)
               

               
               79-334, gnl|Mm7|chr11 (4092293-4092550)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               79-334, gnl|bosTau2|chr17 (42576765-42576504)
               

               
               79-334, gnl|Hg17|chr22 (29100364-29100108)
               

               
               79-334, gnl|Mm7|chr11 (4092293-4092550)

	79-334, gnl\|bosTau2\|chr17 (42576765-42576504)
	79-334, gnl\|Hg17\|chr22 (29100364-29100108)
	79-334, gnl\|Mm7\|chr11 (4092293-4092550)