Non-Coding RNA Search

Ova2-C0003275_C03

Sequence:


               
               CTGGAGGGCGAAGCCGGTGGAGTGAGAGGATGGGCGAGCAGTCTGAATGCCAGAATGGAT
AACCGTTTCGCTACAGCCTTTGTGATTGCCTGTGTGCTTAGTCTTATCTCCACCATCTAC
ATGGCCGCCTCCATAGGCACAGACTTCTGGTATGAGTATCAAAGTCCTGCTCAAGAGAAT
TCTAGTGATGCGAATAGAATTGCCTGGGAAGATTTCATGGGCGATGAGGCGGATGAGAAG
ACCTACAACGATGCTCTGTTCCGGTACAACGGCAACTTGGGATTGTGGAGACGCTGTATC
ACCATTCCCAAAAACACTCACTGGTATGCTCCGCCGGAAAGGACAGAGTCATTTGAAGTG
GTTACAAAATGCATGAGTTTCACACTAAACGAACAGTTCATGGAGGAGTATGTTGATCCT
GGAAACCACAACAGTGGCATTGACCTGCTTCGGACCTACCTCTGGCGCTGCCAGTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAGGGCGAAGCCGGTGGAGTGAGAGGATGGGCGAGCAGTCTGAATGCCAGAATGGAT
AACCGTTTCGCTACAGCCTTTGTGATTGCCTGTGTGCTTAGTCTTATCTCCACCATCTAC
ATGGCCGCCTCCATAGGCACAGACTTCTGGTATGAGTATCAAAGTCCTGCTCAAGAGAAT
TCTAGTGATGCGAATAGAATTGCCTGGGAAGATTTCATGGGCGATGAGGCGGATGAGAAG
ACCTACAACGATGCTCTGTTCCGGTACAACGGCAACTTGGGATTGTGGAGACGCTGTATC
ACCATTCCCAAAAACACTCACTGGTATGCTCCGCCGGAAAGGACAGAGTCATTTGAAGTG
GTTACAAAATGCATGAGTTTCACACTAAACGAACAGTTCATGGAGGAGTATGTTGATCCT
GGAAACCACAACAGTGGCATTGACCTGCTTCGGACCTACCTCTGGCGCTGCCAGTTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37183359|gb|AAQ89479.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37183359|gb|AAQ89479.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               115-234, + strand, RNAz p=0.505636

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               115-234, + strand, RNAz p=0.505636

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               36-355, gnl|bosTau2|chr1 (22364738-22364421)
               

               
               36-355, gnl|Hg17|chr3 (99722977-99722660)
               

               
               36-355, gnl|Mm7|chr16 (58665595-58665912)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-355, gnl|bosTau2|chr1 (22364738-22364421)
               

               
               36-355, gnl|Hg17|chr3 (99722977-99722660)
               

               
               36-355, gnl|Mm7|chr16 (58665595-58665912)

	36-355, gnl\|bosTau2\|chr1 (22364738-22364421)
	36-355, gnl\|Hg17\|chr3 (99722977-99722660)
	36-355, gnl\|Mm7\|chr16 (58665595-58665912)