Non-Coding RNA Search

Ova2-C0003275_E03

Sequence:


               
               GCCAGTCAGTCTCCCACACGTCTGTCACCTTGCTCCTTGTAGAACCCAGACTGATGGCCA
GTCTGAATGTGTCCCTCTCTTTCTTTTTTGCTACCTGCGCCATCTGTGAGGTGGCTAGGA
GGGCATCTAAAGCCCTGCTCCCAGCAGGTACCTATGCCAGTTTTGCACGGGAGGCAGTGG
GCGCAGCCCAGCTGGCAGCCTGTTGCCTAGAGATGCGAGTGCTGGTGGAGCTCGGCCCCT
GGGCTGGGGGTTTCGGGCCCGACCTGTTGCTGACCCTGGTGTTCCTGCTTTTCCTAGTGC
ATGGGGTCACCTTTGACGGGGCCTCTGCCAACCCCACTGTGGCCTTGCAGGAGTTCCTCA
TGGTGGAGGCGTCGCTGCCCAGTACTCTGCTGAAACTGTTGGCCCAGGTGCTGGGCGCGC
AGGCCGCCTGTGCCCTGACCCAGCGCTGCTGGACCTGGGAGCTCAGCGAACTACACTTGC
TGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAGTCAGTCTCCCACACGTCTGTCACCTTGCTCCTTGTAGAACCCAGACTGATGGCCA
GTCTGAATGTGTCCCTCTCTTTCTTTTTTGCTACCTGCGCCATCTGTGAGGTGGCTAGGA
GGGCATCTAAAGCCCTGCTCCCAGCAGGTACCTATGCCAGTTTTGCACGGGAGGCAGTGG
GCGCAGCCCAGCTGGCAGCCTGTTGCCTAGAGATGCGAGTGCTGGTGGAGCTCGGCCCCT
GGGCTGGGGGTTTCGGGCCCGACCTGTTGCTGACCCTGGTGTTCCTGCTTTTCCTAGTGC
ATGGGGTCACCTTTGACGGGGCCTCTGCCAACCCCACTGTGGCCTTGCAGGAGTTCCTCA
TGGTGGAGGCGTCGCTGCCCAGTACTCTGCTGAAACTGTTGGCCCAGGTGCTGGGCGCGC
AGGCCGCCTGTGCCCTGACCCAGCGCTGCTGGACCTGGGAGCTCAGCGAACTACACTTGC
TGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               85-204, + strand, RNAz p=0.806947

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               85-204, + strand, RNAz p=0.806947

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               46-483, gnl|bosTau2|chr3 (83179801-83180238)
               

               
               46-483, gnl|Hg17|chr2 (241342252-241341815)
               

               
               46-483, gnl|Mm7|chr1 (92914205-92914641)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-483, gnl|bosTau2|chr3 (83179801-83180238)
               

               
               46-483, gnl|Hg17|chr2 (241342252-241341815)
               

               
               46-483, gnl|Mm7|chr1 (92914205-92914641)

	46-483, gnl\|bosTau2\|chr3 (83179801-83180238)
	46-483, gnl\|Hg17\|chr2 (241342252-241341815)
	46-483, gnl\|Mm7\|chr1 (92914205-92914641)