Non-Coding RNA Search

Ova2-C0003275_G20

Sequence:


               
               GTTGGCCGCATCCACTTGAGTCCACAGGGTGGCCCAGAGTCAGTGGGTGAGGTATTCCGT
CTAGGCCGGCCCCGGCTGGCTGCCCACTGTGCCAGATGGACACTAGAACCAGGGCAGTGC
CCAAGAAAACGGGCCCTGGCCCTGACGGGGCTGGTGGAAGCAGCAGGTGAGGAGGCAGGG
CCCCTCACTGAGGCTTTGCTGGCTGTGGTAATGGGGGTTGAGTCATAGTGCATATGCTCT
AGGCTAAACTATTGGCATCCCTGGGAGAGGACCCAAGGGATGAGTTGGCTGTGAAGGAGG
CCTCTCAGCATGAGAGAAGCCTGCAGAAGGAGCTATCCTCAGGGACTGAAGAGAAAATGG
AACTGAATCCCATGATGAAGAGCTGAAGATCCATGACTAACAAGCCAATACCAGAGTCTG
CAGGAGTCCAGAGGGACAGCTCAGGCCCAGGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGGCCGCATCCACTTGAGTCCACAGGGTGGCCCAGAGTCAGTGGGTGAGGTATTCCGT
CTAGGCCGGCCCCGGCTGGCTGCCCACTGTGCCAGATGGACACTAGAACCAGGGCAGTGC
CCAAGAAAACGGGCCCTGGCCCTGACGGGGCTGGTGGAAGCAGCAGGTGAGGAGGCAGGG
CCCCTCACTGAGGCTTTGCTGGCTGTGGTAATGGGGGTTGAGTCATAGTGCATATGCTCT
AGGCTAAACTATTGGCATCCCTGGGAGAGGACCCAAGGGATGAGTTGGCTGTGAAGGAGG
CCTCTCAGCATGAGAGAAGCCTGCAGAAGGAGCTATCCTCAGGGACTGAAGAGAAAATGG
AACTGAATCCCATGATGAAGAGCTGAAGATCCATGACTAACAAGCCAATACCAGAGTCTG
CAGGAGTCCAGAGGGACAGCTCAGGCCCAGGGGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-426, + strand, RNAz p=0.998489

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-426, + strand, RNAz p=0.998489

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of AK023125, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of AK023125, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-452, gnl|bosTau2|chr25 (23275428-23275879)
               

               
               1-452, gnl|Hg17|chr16 (31385466-31385927)
               

               
               1-452, gnl|Mm7|chr7 (124341148-124341595)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-452, gnl|bosTau2|chr25 (23275428-23275879)
               

               
               1-452, gnl|Hg17|chr16 (31385466-31385927)
               

               
               1-452, gnl|Mm7|chr7 (124341148-124341595)

	1-452, gnl\|bosTau2\|chr25 (23275428-23275879)
	1-452, gnl\|Hg17\|chr16 (31385466-31385927)
	1-452, gnl\|Mm7\|chr7 (124341148-124341595)